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Hire Dr. Mirko T.

Italy

USD 50 /hr

Bioinformatician in human genomics and nutrigenomics | GWAS, PRS and Multi-Omics in human complex diseases and traits

Profile Summary

Areas of interest and expertise: - Analysis of array-based and NGS data: - Handling of whole-exome (WES) and whole-genome (WGS) sequencing data - Genotype imputation - Genome-wide association studies (GWAS) - Polygenic risk score (PRS) - Integrative multi-omics analysis My research focuses on human genomics and nutrigenomics, with regards to: - (poly)phenols and cardiometabolic health - eosinophilic granulomatosis with polyangiitis (EGPA) - renal traits and kidney diseases - multi-omics data integration

Subject Matter Expertise

• ★ Genomics
• ★ Bioinformatics
• ☆ Biostatistics
• ☆ Genetics
• ☆ Next Generation Sequencing (NGS)
• ☆ DNA Sequencing
• ☆ Genome Sequencing
• ☆ Exome Sequencing
• ☆ Meta-Analysis
• ☆ Nutrition Science
• ☆ Population Genetics
• ☆ R
• ☆ Technical & Scientific Writing
• ☆ Journal Selection
• ☆ Manuscript & Journal Article Writing
• ☆ Science Communication

Services

• Writing
• Data & AI

Writing Technical Writing, General Proofreading & Editing, Translation

Data & AI Statistical Analysis, Data Visualization, Data Cleaning, Data Processing

Work Experience

Post-Doctoral Researcher

University of Parma

March 2024 - Present

Visiting Researcher

University of Cambridge

August 2023 - Present

PhD student

GMLab - University of Verona

October 2020 - September 2024

Dottorandi

Universita' degli Studi di VERONA

October 2020 - October 2023

Visiting PhD Student

Erasmus MC

March 2023 - May 2023

Trainee student

GMLab - University of Verona

September 2019 - July 2020

Trainee student

Biochemistry and Molecular Biophysics (BMB) research group - University of Verona

March 2018 - July 2018

Education

Dottorato in Scienze Applicate della Vita e della Salute (Dipartimento di Neuroscienze, Biomedicina e Movimento)

Università degli Studi di Verona

October 2020 - Present

PhD

University of Verona

October 2020 - September 2024

Laurea Magistrale in Molecular and Medical Biotechnology (Dipartimento di Biotecnologie)

Università degli Studi di Verona

October 2018 - July 2020

M.Sc (Master of Science)

University of Verona

October 2018 - July 2020

Bachelor of Science

University of Verona

October 2015 - November 2018

Laurea in Bioinformatica (Dipartimento di Informatica)

Università degli Studi di Verona

October 2015 - November 2018

Certifications

• Teacher training

  University of Verona

  September 2021 - Present

Publications

JOURNAL ARTICLE

Treccani, Mirko and Locatelli, Elena and Patuzzo, Cristina and Malerba, Giovanni(2023). A broad overview of genotype imputation: Standard guidelines, approaches, and future investigations in genomic association studies . BIOCELL. 47. (6). p. 1225--1241.

Santoro, Gloria and Lombardi, Gianmarco and Andreola, Stefano and Salvagno, Gian Luca and Treccani, Mirko and Locatelli, Elena and Ferraro, Pietro Manuel and Lippi, Giuseppe and Malerba, Giovanni and Gambaro, Giovanni(2023). Association analysis of 10 candidate genes causing Mendelian calcium nephrolithiasis in the INCIPE study: a South European general population cohort . CLINICAL KIDNEY JOURNAL. 16. (3). p. 521--527.

CONFERENCE POSTER

Locatelli, Elena and Treccani, Mirko and Patuzzo, Cristina and Veschetti, Laura and DE TOMI, Elisa and Dagnogo, Dramane and Gallinaro, Martina and Stefani, Chiara and Zipeto, Donato and Tamburin, Stefano and Malerba, Giovanni(2022). Testing the performance of the imputation of MHC region in large datasets when using different reference panels . 1--1

Treccani, M and Veschetti, L and Malerba, G(2022). Towards pocket-sized genomic analyses: cross-platform benchmark of multi-organism genomic data indexing and alignment . 80--81

Treccani, Mirko and Veschetti, Laura and Malerba, Giovanni(2022). The BioVRPi project: a valuable and sustainable alternative for genomic analysis . 22--22

Locatelli, Elena and MORON DALLA TOR, Lucas and Treccani, Mirko and Veschetti, Laura and DE TOMI, Elisa and Stefani, Chiara and Tamburin, Stefano and Zipeto, Donato and Trabetti, Elisabetta and Patuzzo, Cristina and Malerba, Giovanni(2021). Dissection of HLA-C gene region to investigate its association with complex traits . 1--6

Treccani, Mirko and Veschetti, Laura and Locatelli, Elena and DE TOMI, Elisa and Leoni, Benedetta and Gallinaro, Martina and Dagnogo, Dramane and MORON DALLA TOR, Lucas and Patuzzo, Cristina and Malerba, Giovanni(2021). Pocket-sized genomics and transcriptomics analyses: a look at the newborn BioVRPi project . F1000RESEARCH. p. 1--1.