Profile Details

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USD 30 /hr

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Hire Dr. Shalini S.

India

USD 30 /hr

Bioinformatics | Genomics | Python | R | Cancer Biology | Research | Scientific Writing

Profile Summary

I am looking for opportunities to gain experience where I can use my molecular and computational biology expertise. I'm experienced in mathematical modelling and bioinformatics analysis including next-generation sequencing (NGS) data analysis: RNA and small RNA sequencing analysis, Gene Set Enrichment Analysis (GSEA) and pathway enrichment analyses. Experienced with biological databases including The Cancer Genome Atlas (TCGA), Genomics of Drug Sensitivity in Cancer (GDSC) and Cancer Cell Line Encyclopedia (CCLE). My data analytics and programming skills include cleaning, preparing, analyzing and visualizing data using Python, R, MATLAB and Shell scripting. Additionally, I'm familiar with molecular biology techniques including mammalian cell culture, Western Blotting, PCR, co-immunoprecipitation and chromatin immunoprecipitation (ChIP). I’m also skilled in research project management: literature search, experimental design, bioinformatics analysis and scientific writing.

Subject Matter Expertise

• ☆ Computational Biology
• ☆ Molecular Biology
• ☆ Omics
• ☆ Transcriptomics
• ☆ Genomics
• ☆ Epigenetics
• ☆ PCR
• ☆ Gene Expression Analysis
• ☆ RNA Sequencing
• ☆ Cell Biology
• ☆ Cell-Based Assays
• ☆ Gene Regulation
• ☆ Data Analysis
• ☆ Data Visualization
• ☆ Data Cleaning
• ☆ Bioinformatics
• ☆ Gene & Protein Expression Analysis
• ☆ Cell Culture
• ☆ Blotting
• ☆ Cytometry
• ☆ Python
• ☆ Matlab
• ☆ R

Services

• Writing
• Research
• Consulting
• Data & AI

Writing Technical Writing

Research Scientific and Technical Research

Consulting Scientific and Technical Consulting

Data & AI Data Visualization, Data Cleaning, Data Processing, Data Insights

Work Experience

Research Fellow

National Brain Research Centre, Gurgaon, India

December 2023 - February 2024

Senior Research Fellow

National Brain Research Centre, Gurgaon, India

August 2020 - November 2023

Education

PhD Cellular and Molecular Neuroscience

National Brain Research Centre

August 2018 - February 2024

MSc Bioinformatics

Jawaharlal Nehru University

July 2016 - July 2018

BSc Microbiology

University of Delhi

July 2013 - June 2016

Certifications

• Certification details not provided.

Publications

JOURNAL ARTICLE

Shalini Sharma, Pruthvi Gowda, Kirti Lathoria, Mithun K Mitra, Ellora Sen (2023). Dynamic modelling predicts lactate and IL-1β as interventional targets in metabolic-inflammation-clock regulatory loop in glioma . Integrative Biology.

Shalini Sharma, Pruthvi Gowda, Kirti Lathoria, Shruti Patrick, Sonia B. Umdor, Ellora Sen (2021). Rewiring of Lactate–Interleukin-1<i>β</i> Autoregulatory Loop with Clock-Bmal1: a Feed-Forward Circuit in Glioma . Molecular and Cellular Biology.

Shalini Sharma, Namrata Dhaka, Ira Vashisht, Manu Kandpal, Manoj Kumar Sharma, Rita Sharma (2020). Small RNA profiling from meiotic and post-meiotic anthers reveals prospective miRNA-target modules for engineering male fertility in sorghum . Genomics.