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Hire Muhammad Ahsan S.

Pakistan

USD 19 /hr

Computational Bioinformatics Specialist | Deep Learning for Drug Discovery, 3D Molecular Modeling & Genomics Analysis

Profile Summary

I am a Computational Bioinformatician with a strong academic background in bioinformatics and artificial intelligence, holding a Bachelor's degree with extensive project experience in machine learning, deep learning, and structural bioinformatics. My expertise lies in developing and deploying AI-powered solutions for drug discovery, protein-ligand interaction modeling, and genomic data analysis. I have designed multiple deep learning pipelines using PyTorch and scikit-learn, including: - 3D CNN models for ligand shape-based virtual screening - Multi-head attention networks for predicting ligand binding affinity - Machine learning pipelines for gene expression classification and biomarker identification I have hands-on experience with: - PDB, SDF, and molecular data processing - Molecular docking, virtual screening, and ligand-based modeling - Voxelization, molecular featurization, and descriptor extraction - NGS and microarray analysis using R (DESeq2, MLSeq, limma) - Python, PyTorch, Biopython, scikit-learn, RDKit, Open Babel, DSSP, PSSM, and ADMET prediction tools I also design custom data pipelines, perform feature engineering on structural and sequence data, and deliver clean, well-documented code for reproducible research. My goal is to collaborate with research groups, biotech startups, and companies in need of robust AI-based modeling, data analysis, or tool development in the life sciences. I’m open to both short-term projects and long-term consulting roles.

Subject Matter Expertise

• ☆ Molecular Modeling
• ☆ Molecular Docking
• ☆ Chemoinformatics
• ☆ Computational Biology
• ☆ Molecular Biology
• ☆ Biomarkers
• ☆ Genetics
• ☆ Microarrays
• ☆ Omics
• ☆ Genomics
• ☆ Epigenetics
• ☆ Next Generation Sequencing (NGS)
• ☆ ATAC-Seq
• ☆ Protein Sequencing
• ☆ Gene Expression Analysis
• ☆ Genome Sequencing
• ☆ RNA Synthesis
• ☆ RNA Sequencing
• ☆ ChIP-Seq
• ☆ Data Analysis
• ☆ Data Processing
• ☆ Machine Learning
• ☆ Artificial Intelligence
• ☆ Deep Learning
• ☆ Bioinformatics
• ☆ Gene & Protein Expression Analysis
• ☆ Systems Biology
• ☆ Structural Bioinformatics
• ☆ Python
• ☆ Tensorflow
• ☆ LaTex
• ☆ R
• ☆ Scikit-learn
• ☆ Markup Languages
• ☆ Drug Discovery

Services

• Writing
• Research
• Data & AI

Writing Technical Writing, Copywriting

Research Gap Analysis, Scientific and Technical Research, Systematic Literature Review, Secondary Data Collection

Data & AI Predictive Modeling, Statistical Analysis, Image Processing, Image Analysis, Algorithm Design-Non ML, Algorithm Design-ML, Data Visualization, Big Data Analytics, Text Mining & Analytics, Data Mining, Data Cleaning, Data Processing, Data Insights

Work Experience

Research Assistant

Government College University, Faisalabad

September 2024 - Present

Education

BS Bioinformatics (Department of Bioinformatics and Biotechnology)

Government College University, Faisalabad

October 2021 - May 2025

Certifications

• Certification details not provided.