Profile Details

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USD 42 /hr

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Hire Jonathan G.

United States

USD 42 /hr

Public health contractor to CDC with over a decade of experience in bacterial genomics and bioinformatics.

Profile Summary

Primary skills: Pipeline development and technical assistance (nextflow, python, perl, python, conda, singularity, SGE experience) Genome assembly, metagenomics, sequencing diagnostics Gene annotation, phylogenetics, pan-genome analysis Data science, network science, complex data Additional skills: Computational logistics and development consultancy experience (including experimental design, server acquisitions and tech transfer). Past academic experience in bacteriology, arachnology, entomology, biochemistry, analytical chemistry and instrument science.

Subject Matter Expertise

• ☆ Computational Biology
• ☆ Evolutionary Biology
• ☆ Microbiology
• ☆ Microbiome Research
• ☆ Parasitology
• ☆ Bacteriology
• ☆ Gram-Negative Bacteria
• ☆ Gram-Positive Bacteria
• ☆ Biostatistics
• ☆ Biochemistry
• ☆ Structural Biology
• ☆ Molecular Biology
• ☆ Genetics
• ☆ Omics
• ☆ Transcriptomics
• ☆ Comparative Genomics
• ☆ Genomics
• ☆ DNA Sequencing
• ☆ Synthetic Genomics
• ☆ Genome Sequencing
• ☆ Recombinant DNA
• ☆ Plasmid DNA
• ☆ Entomology/Insects
• ☆ Medical Entomology
• ☆ Computer Science
• ☆ Parallel Computing
• ☆ Data Analysis
• ☆ Algorithm Design
• ☆ Data Exploration
• ☆ Cluster Analysis
• ☆ Machine Learning
• ☆ Statistics
• ☆ Statistical Theory
• ☆ Applied Statistics
• ☆ Regression Analysis
• ☆ Multivariate Analysis
• ☆ Nonlinear Regression
• ☆ Bayesian Statistics
• ☆ Correlation Analysis
• ☆ Statistical Computing
• ☆ Study Design
• ☆ Statistical Review
• ☆ Health Data Analysis
• ☆ Bioinformatics
• ☆ Gene & Protein Expression Analysis
• ☆ Systems Biology
• ☆ Structural Bioinformatics
• ☆ Pathogenesis
• ☆ Clinical Microbiology
• ☆ Phylogenetics
• ☆ Population Genetics
• ☆ Python
• ☆ Public Health
• ☆ Disease Control And Prevention
• ☆ Hypothesis
• ☆ Research Methodology
• ☆ Feasibility Studies

Services

• Writing
• Research
• Consulting
• Data & AI

Writing Technical Writing

Research Feasibility Study, Technology Scouting, Fact Checking, Scientific and Technical Research

Consulting Scientific and Technical Consulting

Data & AI Statistical Analysis, Algorithm Design-Non ML, Big Data Analytics, Data Processing, Data Insights

Work Experience

Contractor

Centers for Disease Control and Prevention

- Present

Graduate Student

Georgia Institute of Technology

2018 - 2025

Bioinformatics Professional Fellow

APHL

July 2018 - July 2019

Education

Doctorate

Georgia Tech

June 2018 - Present

Masters of Science

Portland State University

September 2015 - June 2017

Certifications

• Certification details not provided.

Publications

JOURNAL ARTICLE

Jonathan G Gerhart, H Auguste Dutcher, Amanda E Brenner, Abraham S Moses, Libor Grubhoffer, Rahul Raghavan (2018). Multiple Acquisitions of Pathogen-Derived Francisella Endosymbionts in Soft Ticks . Genome Biology and Evolution.

Jonathan G. Gerhart, Abraham S. Moses, Rahul Raghavan (2016). A Francisella-like endosymbiont in the Gulf Coast tick evolved from a mammalian pathogen . Scientific Reports.