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Hire Dr. Işıl T.

Turkey

Bioinformatician and Computational Biologist, Data Analyst

Profile Summary

Ph.D. degree in Molecular Biology and Genetics. Research area in Bioinformatics and Computational Biology with demonstrated experience in the analysis of high-throughput sequencing data, natural language processing, phylogenomics, and cancer informatics. Fluency in programming languages such as Python, R, Javascript, SQL, PHP, and NoSQL. Experience in writing high-quality peer-reviewed scientific articles in ISI and Scopus indexed journals. Experience as a Reviewer in Computational Biology and Bioinformatics journal.

Subject Matter Expertise

• ☆ Python
• ☆ SPSS
• ☆ Matlab
• ☆ SQL
• ☆ Excel
• ☆ Tensorflow
• ☆ R
• ☆ Scikit-learn
• ☆ Oncology
• ☆ Precision Medicine
• ☆ Neuro-Oncology
• ☆ Technical & Scientific Writing
• ☆ Manuscript & Journal Article Writing
• ☆ Literature Review
• ☆ Systematic Literature Review
• ☆ Scientific Proofreading & Editing
• ☆ Proofreading & Editing
• ☆ Language Translation

Services

• Writing
• Research
• Consulting
• Data & AI
• Product Development

Writing Clinical Trial Documentation, Technical Writing, Copywriting

Research Market Research, Meta-Research, Gap Analysis, Systematic Literature Review

Consulting Scientific and Technical Consulting

Data & AI Statistical Analysis, Algorithm Design-Non ML, Data Visualization, Big Data Analytics, Data Processing, Data Insights

Product Development Product Evaluation

Work Experience

Visitor Research Asistant

Izmir Biomedicine and Genome Center (IBG)

March 2018 - Present

Education

Computer Programming

Dokuz Eylül University - Turkey

January 2019 - Present

Izmir Biomedicine and Genome Center (IBG)

February 2018 - Present

Izmir International Biomedicine and Genome Institute, Dokuz Eylül University

February 2018 - 2022

Certifications

• Certificate for Reviewer

  Computational Biology and Bioinformatics(CBB)

  https://www.sciencepg.com/journal/index?journalid=112

  March 2022 - Present

Publications

JOURNAL ARTICLE

Mehtap Ozkur and Necla Benlier and I{\c{s}}{\i}l Takan and Christina Vasileiou and Alexandros G. Georgakilas and Athanasia Pavlopoulou and Zafer Cetin and Eyup Ilker Saygili(2022). Ginger for Healthy Ageing: A Systematic Review on Current Evidence of Its Antioxidant, Anti-Inflammatory, and Anticancer Properties . Oxidative Medicine and Cellular Longevity. 2022. p. 1--16. Hindawi Limited

Mehtap Ozkur, Necla Benlier, Işıl Takan, Christina Vasileiou, Alexandros G. Georgakilas, Athanasia Pavlopoulou, Zafer Cetin, Eyup Ilker Saygili, German Gil (2022). Ginger for Healthy Ageing: A Systematic Review on Current Evidence of Its Antioxidant, Anti-Inflammatory, and Anticancer Properties . Oxidative Medicine and Cellular Longevity.

Mehtap Ozkur and Necla Benlier and I{\c{s}}{\i}l Takan and Christina Vasileiou and Alexandros G. Georgakilas and Athanasia Pavlopoulou and Zafer Cetin and Eyup Ilker Saygili(2022). Ginger for Healthy Ageing: A Systematic Review on Current Evidence of Its Antioxidant, Anti-Inflammatory, and Anticancer Properties . Oxidative Medicine and Cellular Longevity. 2022. p. 1--16. Hindawi Limited

Dinis Faustino and Heinrich Brinkmeier and Stella Logotheti and Anika Jonitz-Heincke and Hande Yilmaz and Isil Takan and Kirsten Peters and Rainer Bader and Hermann Lang and Athanasia Pavlopoulou and Brigitte M. Pützer and Alf Spitschak(2022). Novel integrated workflow allows production and in-depth quality assessment of multifactorial reprogrammed skeletal muscle cells from human stem cells . Cellular and Molecular Life Sciences. 79. (5). Springer Science and Business Media {LLC}

Thrombocytopenia in COVID‑19 and vaccine‑induced thrombotic thrombocytopenia. @article{PMID:35059730, title = {Thrombocytopenia in COVID‑19 and vaccine‑induced thrombotic thrombocytopenia. }, author = {Geronikolou SA and Takan I and Pavlopoulou A and Mantzourani M and Chrousos GP}, doi = {10.3892/ijmm.2022.5090}, journal = {International journal of molecular medicine}, month = {03}, year = {2022} } . International journal of molecular medicine.

Athanasia Pavlopoulou, Seyedehsadaf Asfa, Evangelos Gioukakis, Ifigeneia V. Mavragani, Zacharenia Nikitaki, Işıl Takan, Jean-Pierre Pouget, Lynn Harrison, Alexandros G. Georgakilas (2021). In Silico Investigation of the Biological Implications of Complex DNA Damage with Emphasis in Cancer Radiotherapy through a Systems Biology Approach . Molecules.

(2021). <i>In Silico</i> Investigation of the Biological Implications of Complex DNA Damage with Emphasis in Cancer Radiotherapy through a Systems Biology Approach . Molecules (Basel, Switzerland).

Athanasia Pavlopoulou and Seyedehsadaf Asfa and Evangelos Gioukakis and Ifigeneia V. Mavragani and Zacharenia Nikitaki and I{\c{s}}{\i}l Takan and Jean-Pierre Pouget and Lynn Harrison and Alexandros G. Georgakilas(2021). In Silico Investigation of the Biological Implications of Complex DNA Damage with Emphasis in Cancer Radiotherapy through a Systems Biology Approach . Molecules. 26. (24). p. 7602. {MDPI} {AG}

Athanasia Pavlopoulou and Seyedehsadaf Asfa and Evangelos Gioukakis and Ifigeneia V. Mavragani and Zacharenia Nikitaki and I{\c{s}}{\i}l Takan and Jean-Pierre Pouget and Lynn Harrison and Alexandros G. Georgakilas(2021). In Silico Investigation of the Biological Implications of Complex DNA Damage with Emphasis in Cancer Radiotherapy through a Systems Biology Approach . Molecules. 26. (24). p. 7602. {MDPI} {AG}

Athanasia Pavlopoulou, Seyedehsadaf Asfa, Evangelos Gioukakis, Ifigeneia V. Mavragani, Zacharenia Nikitaki, IŞIL TAKAN, Jean-Pierre Pouget, Lynn Harrison, Alexandros Georgakilas (2021). <i>In Silico</i> Investigation of the Biological Implications of Complex DNA Damage with Emphasis in Cancer Radiotherapy through a Systems Biology Approach . Molecules.

Dionysia Theofylaktou, Işıl Takan, G&#246;khan Karak&#252;lah, G&#246;kay Mehmet Biz, Vaso Zanni, Athanasia Pavlopoulou, Alexandros G. Georgakilas, Anderson J. Teodoro(2021). Mining Natural Products with Anticancer Biological Activity through a Systems Biology Approach . Oxidative Medicine and Cellular Longevity. 2021. p. 1--17. Hindawi Limited

Dionysia Theofylaktou and I{\c{s}}{\i}l Takan and Gökhan Karakülah and Gökay Mehmet Biz and Vaso Zanni and Athanasia Pavlopoulou and Alexandros G. Georgakilas(2021). Mining Natural Products with Anticancer Biological Activity through a Systems Biology Approach . Oxidative Medicine and Cellular Longevity. 2021. p. 1--17. Hindawi Limited

Stephan Marquardt and Athanasia Pavlopoulou and I{\c{s}}{\i}l Takan and Prabir Dhar and Brigitte M. Pützer and Stella Logotheti(2021). A Systems-Based Key Innovation-Driven Approach Infers Co-option of Jaw Developmental Programs During Cancer Progression . Frontiers in Cell and Developmental Biology. 9. Frontiers Media {SA}

Bioinformatic approaches to the investigation of the atavistic genes implicated in cancer @article{2021, doi = {10.52586/4944}, url = {https://doi.org/10.52586%2F4944}, year = 2021, publisher = {Bioscience Research Institute Pte. Ltd.}, volume = {26}, number = {8}, pages = {279}, title = {Bioinformatic approaches to the investigation of the atavistic genes implicated in cancer}, journal = {Frontiers in Bioscience-Landmark}} . Frontiers in Bioscience-Landmark.

Stella Logotheti and Stephan Marquardt and Christin Richter and Ren{\'{e}}e Sophie Hain and Nico Murr and I{\c{s}}{\i}l Takan and Athanasia Pavlopoulou and Brigitte M. Pützer(2020). Neural Networks Recapitulation by Cancer Cells Promotes Disease Progression: A Novel Role of p73 Isoforms in Cancer-Neuronal Crosstalk . Cancers. 12. (12). p. 3789. {MDPI} {AG}