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Expert in computational oncology, AI application in medicine and bioinformaticis with more than 11 years of experience.

Profile Summary

Computational Oncologist in hepato-biliary clinical research. We use AI, ML and computational methods for data-driven research including omics analysis, multi-omics data integration, multi-modality modelling. We aim to provide clinical tools (biomarker discovery, risk score development, disease trajectory models, etc.) and to understand the mechanisms of action of autoimmune disorders (eg. Primary Sclerosing Cholangitis, Inflammatory Bowel Disease) and different types of Gastro-Intestinal Cancers (eg. Cholangiocarcinoma, Gallbladder Cancer, Hepatocellular Carcinoma, Colorectal Cancer). Disciplines Oncology, Immunology, Bioinformatics Artificial Intelligence

Subject Matter Expertise

• ★ Machine Learning
• ★ Bioinformatics
• ★ Gastroenterology & Hepatology
• ☆ Biochemistry
• ☆ Molecular Biology
• ☆ Biomarkers
• ☆ Omics
• ☆ Transcriptomics
• ☆ Lipidomics
• ☆ Proteomics
• ☆ Metabolomics
• ☆ Genomics
• ☆ Data Analysis
• ☆ Artificial Intelligence
• ☆ Gene & Protein Expression Analysis
• ☆ Biomarker Discovery
• ☆ In vitro Diagnostics
• ☆ Biomarker Analysis
• ☆ Oncology
• ☆ Liver Cancer
• ☆ Health Risk Assessments

Services

• Writing
• Research
• Consulting
• Data & AI

Writing Clinical Trial Documentation, Medical Writing, Non-Medical Regulatory Writing, Technical Writing, Creative Writing, General Proofreading & Editing, Translation

Research Fact Checking, Gap Analysis, Scientific and Technical Research, Systematic Literature Review

Consulting Scientific and Technical Consulting

Data & AI Predictive Modeling, Statistical Analysis, Image Processing, Image Analysis, Algorithm Design-Non ML, Algorithm Design-ML, Data Visualization, Big Data Analytics, Text Mining & Analytics, Data Mining, Data Cleaning, Data Processing, Data Insights

Work Experience

Karolinska Institutet

- Present

Assistant professor in Hepatology and Computational Oncology

Karolinska Institutet

September 2024 - Present

Researcher

Karolinska Institutet

February 2022 - Present

Postdoctoral fellow

Stockholm University

August 2018 - March 2021

PhD student

Carthage University

October 2013 - August 2018

Education

PhD (Animal Breeding Department)

Université de Carthage

January 2014 - August 2018

Master degree (Animal Breeding Department)

Institut National Agronomique de Tunis

October 2010 - January 2013

National Engineer (Animal Breeding Department)

Institut National Agronomique de Tunis

October 2004 - July 2010

Certifications

• Certification details not provided.

Publications

JOURNAL ARTICLE

Ghada Nouairia, Martin Cornillet, Aiva Lundberg Båve, Dan Sun, Christina Villard, Aristeidis Grigoriadis, Erik von Seth, Hannes Jansson, María Bueno Álvez, Sofia Bergström, et al.(2026). Proteome-scale autoantibody profiling in PSC: Associations with clinical phenotypes and evidence for neuroendocrine deregulations . JHEP REPORTS. 8. (3). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 101719.

Ghada Nouairia, Antonio Akiki, Hanna Jacobsson, Martin Cornillet, Niklas K Björkström, Ernesto Sparrelid, Helena Taflin, Hannes Jansson(2026). Corrigendum to "External validation of plasma CSF1 as a preoperative prognostic marker in patients with resectable intrahepatic cholangiocarcinoma" [Europ J Surg Oncol 51 (2025) 110123] . EJSO. 52. (1). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 111189.

Nouairia, Ghada, Cornillet, Martin, Bave, Aiva Lundberg, Sun, Dan, Villard, Christina, Grigoriadis, Aristeidis, Von Seth, Erik, Jansson, Hannes, Alvez, Maria Bueno, Bergstrom, Sofia, et al. (2026). Proteome-scale autoantibody profiling in PSC: Associations with clinical phenotypes and evidence for neuroendocrine deregulations . JHEP Reports.

Ghada Nouairia, Antonio Akiki, Hanna Jacobsson, Martin Cornillet, Niklas K. Björkström, Ernesto Sparrelid, Helena Taflin, Hannes Jansson (2025). External validation of plasma CSF1 as a preoperative prognostic marker in patients with resectable intrahepatic cholangiocarcinoma . European Journal of Surgical Oncology.

Ghada Nouairia, Antonio Akiki, Hanna Jacobsson, Martin Cornillet, Niklas K Björkström, Ernesto Sparrelid, Helena Taflin, Hannes Jansson(2025). External validation of plasma CSF1 as a preoperative prognostic marker in patients with resectable intrahepatic cholangiocarcinoma . EJSO. 51. (8). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 110123.

Ghada Nouairia, Martin Cornillet, Hannes Jansson, Annika Bergquist, Ernesto Sparrelid(2025). Towards precision medicine strategies using plasma proteomic profiling for suspected gallbladder cancer: A pilot study . JHEP REPORTS. 7. (6). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 101365.

Ghada Nouairia, Robin Zenlander, Sonia Shtembari, Daniel Hagey, Olof Danielsson, Mikael Bjornstedt, Stefan Gilg, Gosta Eggertsen, Hugh Salter, Per Stal(2025). WED-141 MicroRNA profiling of hepatocellular carcinoma can improve the prediction of tumor recurrence after liver resection . JOURNAL OF HEPATOLOGY. 82. Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString s421--s422. Elsevier

Ghada Nouairia, Martin Cornillet, Hannes Jansson, Annika Bergquist, Ernesto Sparrelid (2025). Towards precision medicine strategies using plasma proteomic profiling for suspected gallbladder cancer: a pilot study . JHEP Reports.

Nouairia, Ghada, Zenlander, Robin, Shtembari, Sonia, Hagey, Daniel, Danielsson, Olof, Bjornstedt, Mikael, Gilg, Stefan, Eggertsen, Gosta, Salter, Hugh, Stal, Per (2025). MicroRNA profiling of hepatocellular carcinoma can improve the prediction of tumor recurrence after liver resection . Journal of Hepatology.

Ghada NOUAIRIA (2024). Etude technico-économique de méthodes d’extraction de l’ADN chez le lapin Européen (Oryctolagus cuniculus) à partir du sang .

Ghada NOUAIRIA (2024). Developing a microsatellite markers-based parentage test for Camelus dromedarius .

Ghada Nouairia, Oscar Jungholm, Carolina Trkulja, Martin Moche, Sreesha P Srinivasa, Maria-Nefeli Christakopoulou, Max Davidson, Anna Reymer, Kent Jardemark, Rafaela Lenza Fogaça, et al.(2024). Novel druggable space in human KRAS G13D discovered using structural bioinformatics and a P-loop targeting monoclonal antibody . SCIENTIFIC REPORTS. 14. (1). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 19656.

Ghada Nouairia, Oscar Jungholm, Carolina Trkulja, Martin Moche, Sreesha P. Srinivasa, Maria-Nefeli Christakopoulou, Max Davidson, Anna Reymer, Kent Jardemark, Rafaela Lenza Fogaça, et al. (2024). Novel druggable space in human KRAS G13D discovered using structural bioinformatics and a P-loop targeting monoclonal antibody . Scientific Reports.

Ghada Nouairia, Antonio Akiki, Hanna Jacobsson, Martin Cornillet, Niklas K Björkström, Ernesto Sparrelid, Helena Taflin, Hannes Jansson (2024). 72320 - External validation of plasma CSF1 as a preoperative prognostic marker in resectable intrahepatic cholangiocarcinoma – a bi-institutional study . British Journal of Surgery.

G Nouairia, M Cornillet, H Jansson, A Bergquist, E Sparrelid(2024). Serum based test to assist preoperative decision making in suspected gallbladder cancer . ANNALS OF ONCOLOGY. 35. Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString S134--S134.

Nouairia, G., Cornillet, M., Jansson, H., Bergquist, A., Sparrelid, E. (2024). Serum based test to assist preoperative decision making in suspected gallbladder cancer . Annals of Oncology.

Ghada NOUAIRIA (2024). Etude technico-économique de méthodes d’extraction de l’ADN chez le lapin Européen (Oryctolagus cuniculus) à partir du sang .

Ghada NOUAIRIA (2024). <b>Comparaison de methodes d'extraction de l'ADN de lapin à partir du sang: Fiabilité et coût</b> .

Ghada Nouairia, Inna Rozman Grinberg, Markel Mart&#237;nez-Carranza, Ornella Bimai, Saher Shahid, Daniel Lundin, Derek T Logan, Britt-Marie Sj&#246;berg, P&#229;l Stenmark(2022). A nucleotide-sensing oligomerization mechanism that controls NrdR-dependent transcription of ribonucleotide reductases . NATURE COMMUNICATIONS. 13. (1). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 2700--2700.

Inna Rozman Grinberg, Markel Mart&#237;nez-Carranza, Ornella Bimai, Ghada Noua&#239;ria, Saher Shahid, Daniel Lundin, Derek T. Logan, Britt-Marie Sj&#246;berg, P&#229;l Stenmark (2022). A nucleotide-sensing oligomerization mechanism that controls NrdR-dependent transcription of ribonucleotide reductases . Nature Communications.

Ghada Nouairia, Yousra Ben Sassi-Zaidy, Aziza Mohamed-Brahmi, Faouzia Charfi-Cheikhrouha, M&#39;Naouer Djemali, Martino Cassandro(2022). Genetic Variability and Population Structure of the Tunisian Sicilo-Sarde Dairy Sheep Breed Inferred from Microsatellites Analysis . GENES. 13. (2).

Ghada Nouairia, Yousra Ben Sassi-Zaidy, Aziza Mohamed-Brahmi, Faouzia Charfi-Cheikhrouha, M&#39;Naouer Djemali, Martino Cassandro (2022). Genetic Variability and Population Structure of the Tunisian Sicilo-Sarde Dairy Sheep Breed Inferred from Microsatellites Analysis . Genes.

Nouairia, Ghada, Ben Sassi-Zaidy, Yousra, Mohamed-Brahmi, Aziza, Charfi-Cheikhrouha, Faouzia, Djemali, M&#39;Naouer, Cassandro, Martino (2022). Genetic Variability and Population Structure of the Tunisian Sicilo-Sarde Dairy Sheep Breed Inferred from Microsatellites Analysis . Genes.

Nouairia, Ghada, Grinberg, Inna Rozman, Martinez-Carranza, Markel, Bimai, Ornella, Shahid, Saher, Lundin, Daniel, Logan, Derek T., Sjoberg, Britt-Marie, Stenmark, Pal (2022). A nucleotide-sensing oligomerization mechanism that controls NrdR-dependent transcription of ribonucleotide reductases . Nature Communications.

Ghada Nouairia, Eugen Schell, Elisabeth Steiner, Niclas Weber, Daniel Lundin, Christoph Loderer(2021). Structural determinants and distribution of phosphate specificity in ribonucleotide reductases . JOURNAL OF BIOLOGICAL CHEMISTRY. 297. (2). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 101008.

Ghada Nouairia, Eugen Schell, Elisabeth Steiner, Niclas Weber, Daniel Lundin, Christoph Loderer (2021). Structural determinants and distribution of phosphate specificity in ribonucleotide reductases . The Journal of Biological Chemistry.

Ghada Nouairia, Eugen Schell, Elisabeth Steiner, Niclas Weber, Daniel Lundin, Christoph Loderer (2021). Structural determinants and distribution of phosphate specificity in ribonucleotide reductases . The Journal of Biological Chemistry.

Schell, E., Nouairia, G., Steiner, E., Weber, N., Lundin, D., Loderer, C.(2021). Structural determinants and distribution of phosphate specificity in ribonucleotide reductases . Journal of Biological Chemistry. 297. (2).

Nouairia, Ghada, Schell, Eugen, Steiner, Elisabeth, Weber, Niclas, Lundin, Daniel, Loderer, Christoph (2021). Structural determinants and distribution of phosphate specificity in ribonucleotide reductases . Journal of Biological Chemistry.

Ghada NOUAIRIA, Sciences, Journal of New, Yahyaoui MH, Yahyaoui MH, Yahyaoui MH, Yahyaoui MH, Cassandro M, Cassandro M, HAMMADI M, et al.(2018). Developing a Microsatellite Markers-Based Parentage Test for Camelus Dromedarius . Journal of New Sciences E-ISSN 2286-5314. e 7.

Ghada Nouairia, Martino Cassandro, Manel Ben larbi, Elizabetta Viale, Mohammed Hammadi, Mohamed Habib Yahyaoui(2018). Developing a microsatellite markers-based parentage test for Camelus dromedarius . Journal of New Sciences. 7. (2).

G Nouairia, S Kdidi, R Ben Salah, M Hammadi, T Khorchani, M H Yahyaoui(2015). Assessing genetic diversity of three Tunisian dromedary camel (<i>Camelus dromedarius</i>) sub populations using microsatellite markers . EMIRATES JOURNAL OF FOOD AND AGRICULTURE. 27. (4). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 362--366.

Nouairia, G., Yahyaoui, M. H., Khorchani, T. (2015). Amplification of alpaca tetranucleotide microsatellite markers in dromedary camel (<i>Camelus dromedarius</i>) . Proceedings of the International Camel Conference, Al-Hasa, Saudi Arabia, 17-20 February.

Nouairia, G., Kdidi, S., Ben Salah, R., Hammadi, M., Khorchani, T., Yahyaoui, M.H.(2015). Assessing genetic diversity of three Tunisian dromedary camel (Camelus dromedarius) sub populations using microsatellite markers . Emirates Journal of Food and Agriculture. 27. (4). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 362-366.

Nouairia, G., Kdidi, S., Ben Salah, R., Hammadi, M., Khorchani, T., Yahyaoui, M. H. (2015). Assessing genetic diversity of three Tunisian dromedary camel (<i>Camelus dromedarius</i>) sub populations using microsatellite markers . Emirates Journal of Food and Agriculture.

Nouairia, G., Yahyaoui, M. H., Khorchani, T. (2015). Amplification of alpaca tetranucleotide microsatellite markers in dromedary camel (<i>Camelus dromedarius</i>) . Proceedings of the International Camel Conference, Al-Hasa, Saudi Arabia, 17-20 February.

Larbi MB, Naouaria G, Yahyaoui MH, Hadded B. Etude technico-économique de méthodes d’extraction de l’ADN chez le lapin Européen (Oryctolagus cuniculus) à partir du sang. Journal of New Sciences [Internet]. 2014 May 1 [cited 2025 Feb 2];e 5. Available from: https://www.jnsciences.org/agri-biotech/13-volume-5/20-etude-technico-economique-de-methodes-d-extraction-de-l-adn-chez-le-lapin-europeen-oryctolagus-cuniculus-a-partir-du-sang.html .

Ghada Nouairia, M Belarbi, M H Yahyaoui, B Hadded(2014). Etude technico-économique de méthodes d’extraction de l’ADN chez le lapin Européen (Oryctolagus cuniculus) à partir du sang . Journal of New Sciences. 5. (https://www.jnsciences.org/agri-biotech/13-volume-5/20-etude-technico-economique-de-methodes-d-extra).

Genetic characterization of dromedary camel (Camelus dromedarius) population in Tunisia (PhD Thesis) .

Genetic variability of dromedary camel in Tunisia: Preliminary results (conference paper) .

Amplification in Camelus dromedarius of microsatellite markers from Lama pacos (Master thesis) .

Developing a microsatellite markers-based parentage test for Camelus dromedarius .

CONFERENCE PAPER

Ghada Nouairia, Robin Zenlander, Sonia Shtembari, Daniel Hagey, Olof Danielsson, Mikael Bjornstedt, Stefan Gilg, Gosta Eggertsen, Hugh Salter, Per Stal(2025). MicroRNA profiling of hepatocellular carcinoma can improve the prediction of tumor recurrence after liver resection. JOURNAL OF HEPATOLOGY. 82.

H Jansson, A Akiki, H Jacobsson, G Nouairia, M Cornillet, N K Bj&#246;rkstr&#246;m, H Taflin, E Sparrelid(2025). External Validation of Plasma CSF1 as a Novel, Well-calibrated Preoperative Prognostic Marker in Patients with Resectable Intrahepatic Cholangiocarcinoma . HPB. 27. Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString s293. Elsevier

Ghada Nouairia, Martin Cornillet, Annika Bergquist(2024). Machine-learning based multi-OMICs analysis of circulome from Primary Sclerosing Cholangitis reveals hallmarks associated with cholangiocarcinoma and absence of inflammatory bowel disease. https://www.ipscsg.org/news/save-the-date-for-the-ipscsg-biennial-meeting-in-stockholm-2024/.

Ghada NOUAIRIA (2024). <b>Genetic variability of dromedary camel in Tunisia: Preliminary results</b> .

Ghada NOUAIRIA (2024). <b>Comparaison de methodes d'extraction de l'ADN de lapin à partir du sang: Fiabilité et coût</b> .

Ghada Nouairia, Antonio Akiki, Hanna Jacobsson, Martin Cornillet, Niklas K Bjorkstrom, Ernesto Sparrelid, Helena Taflin, Hannes Jansson(2024). External validation of plasma CSF1 as a preoperative prognostic marker in resectable intrahepatic cholangiocarcinoma - a bi-institutional study . BJS-BRITISH JOURNAL OF SURGERY. 111. (znae175.019).

Ghada Nouairia, Inna Rozman-Grinberga, Daniel Lundin, Britt-Marie Sj&#246;berg(2019). Class Id MnIVMnIII ribonucleotide reductase from Facklamia ignava. https://www.osti.gov/servlets/purl/1558092.

Bollinger, Martin (2019). 2019 Metals in Biology Gordon Research Conference/Bioinorganic Chemistry GRS .

Ghada Nouairia, M H Yahyaoui, B Khorchani(2014). Genetic variability of dromedary camel in Tunisia: Preliminary results . https://www.researchgate.net/publication/272291464_Genetic_variability_of_dromedary_camel_in_Tunisia_Preliminary_results. 1.

Ghada Nouairia, M H Yahyaoui, T Khorchani(2013). AMPLIFICATION OF ALPACA TETRANUCLEOTIDEMICROSATELLITE MARKERS IN DROMEDARYCAMEL (Camelus dromedarius) . https://pps.kaznu.kz/kz/Main/FileShow2/39771/76/3/700/0//. p63-64. (2013). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 63--64.

DISSERTATION THESIS

Ghada NOUAIRIA, Brahim Haddad, M. H. Yahyaoui (2025). Genetic characterization of dromedary camel (<i>Camelus dromedarius</i>) population in Tunisia . figshare.

Ghada NOUAIRIA, Brahim Haddad, M. H. Yahyaoui (2025). Genetic characterization of dromedary camel (<i>Camelus dromedarius</i>) population in Tunisia . figshare.

Ghada NOUAIRIA, Manel Ben Larbi, Brahim Haddad (2025). <b>Comparaison de methodes d'extraction de l'ADN de lapin à partir du sang: Fiabilité et coût</b> . figshare.

Ghada NOUAIRIA, Manel Ben Larbi, Brahim Haddad (2025). Comparaison de methodes d'extraction de l'ADN de lapin à partir du sang: Fiabilité et coût . figshare.

Ghada NOUAIRIA, Manel Ben Larbi, Brahim Haddad (2025). Comparaison de methodes d'extraction de l'ADN de lapin à partir du sang: Fiabilité et coût . figshare.

Ghada NOUAIRIA (2024). Amplification in <i>Camelus dromedarius</i> of microsatellite markers from <i>Lama pacos (Master thesis)</i> .

Ghada NOUAIRIA (2024). Amplification in <i>Camelus dromedarius</i> of microsatellite markers from <i>Lama pacos (Master thesis)</i> . figshare.

Ghada Nouairia, Mohamed Habib Yahyaoui, Brahim Hadded(2018). Genetic characterization of dromedary camel (Camelus dromedarius) population in Tunisia . MINISTERE DE L’ENSEIGNEMENT SUPERIEUR ET DE LA RECHERCHE SCIENTIFIQUE

Nouairia G., Hadded B., Yahyaoui MY. Genetic characterization of dromedary camel (Camelus dromedarius) in Tunisia. 2018. [Doctoral dissertation, Carthage University]. Ministere de l'enseignement superieur et de la rechercher scientifique en Tunisie. http://www.theses.rnu.tn/fr/dynamique/uploads/1f3aff41c97d8a3cfa7ac00d18a96be5.pdf .

Ghada Jebah Nouairia, Mohamed Habib Yahyaoui, Brahim Hadded(2013). Essai chez le dromadaire (Camelus dromedarius) des marqueurs microsatellites isolés chez l'alpaca (Lama pacos) . Unpublished. Unpublished

Nouairia G., Belarbi M., Yahyaoui MH., Hadded B. Comparaison de methodes d'extraction de l'ADN de lapin à partir du sang: Fiabilité et coût. 2010. Dissertation thesis, Carthage University .

Ghada Nouairia, Manel Belarbi, Brahim Hadded(2010). Comparaison de methodes d'extraction de l'ADN de lapin à partir du sang: Fiabilité et coût .

Ghada Nouairia, M H Yahyaoui, Brahim Hadded Amplification in Camelus dromedarius of microsatellite markers from Lama pacos .

OTHER

Ghada NOUAIRIA (2025). <b>Genetic variability of dromedary camel in Tunisia: Preliminary results</b> . figshare.

Ghada NOUAIRIA (2025). <b>Genetic variability of dromedary camel in Tunisia: Preliminary results</b> . figshare.

Ghada NOUAIRIA (2025). <b>Genetic variability of dromedary camel in Tunisia: Preliminary results</b> . figshare.

Ghada NOUAIRIA (2025). Genetic variability of dromedary camel in Tunisia: Preliminary results . figshare.

Ghada NOUAIRIA (2024). Developing a microsatellite markers-based parentage test for Camelus dromedarius . figshare.

Ghada NOUAIRIA (2024). Etude technico-économique de méthodes d’extraction de l’ADN chez le lapin Européen (Oryctolagus cuniculus) à partir du sang . figshare.

Ghada NOUAIRIA (2024). <b>Genetic variability of dromedary camel in Tunisia: Preliminary results</b> . figshare.

Ghada NOUAIRIA (2024). <b>Genetic variability of dromedary camel in Tunisia: Preliminary results</b> . figshare.

Ghada Nouairia, Antonio Akiki, Hanna Jacobsson, Martin Cornillet, Niklas K Bj&#246;rkstr&#246;m, Ernesto Sparrelid, Helena Taflin, Hannes Jansson(2024). External validation of plasma CSF1 as a preoperative prognostic marker in patients with resectable intrahepatic cholangiocarcinoma . 2024.11.27.24318028Cold Spring Harbor Laboratory

Nouairia, Ghada Jebah, M.H. Yahyaoui, Touhami Khorchani (2014). Genetic variability of dromedary camel in Tunisia: Preliminary results .

Nouairia, Ghada Jebah, M. H. Yahyaoui, T. Khorchani (2013). Amplification of alpaca tetranucleotide microsatellite markers in dromedary camel (Camelus dromedarius) .

LECTURE SPEECH

Ghada Nouairia, Martin Cornillet, Annika Bergquist(2024). Genome-wide methylation profiling of biliary tract cancers reveals pathogenesis mechanisms and clinical applications.

Ghada Nouairia, Martin Cornillet, Annika Bergquist(2023). Feature selection for omics-based biomarkers in rare diseases.

Ghada Nouairia, Martin Cornillet, Annika Bergquist(2023). Genome-wide methylation of biliary tract cancers for pathogenesis mechanisms and clinical applications.