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USD 12 /hr

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Hire Amir Ali J.

Germany

USD 12 /hr

Bioinformatics & Genomics Analyst| RNA-seq & scRNA-seq | R/Python Data Analysis| Machine Learning | Scientific Writing

Profile Summary

I am a bioinformatics researcher and scientific writer with a Master’s in Stem Cell and Regenerative Medicine. I specialize in multi-omics data analysis and biomarker discovery using bulk and single-cell RNA-seq, microarray, and machine learning methods (SVM, Random Forest, XGBoost). Skilled in R and Python, I integrate and visualize complex datasets to uncover diagnostic and prognostic insights. My experience includes osteosarcoma biomarker discovery, scRNA-seq immune profiling, and scientific article preparation. I offer RNA-seq analysis, biomarker workflow design, and scientific writing support for publication-ready results.

Subject Matter Expertise

• ☆ Computational Biology
• ☆ Biostatistics
• ☆ Mathematical Biology
• ☆ Molecular Biology
• ☆ Biomarkers
• ☆ Genetics
• ☆ Microarrays
• ☆ Molecular Evolution
• ☆ PCR
• ☆ Next Generation Sequencing (NGS)
• ☆ Gene Expression Analysis
• ☆ Genome Sequencing
• ☆ RNA Sequencing
• ☆ Cell Biology
• ☆ Cell Signaling Pathways
• ☆ Membrane Biology
• ☆ Gene Regulation
• ☆ Stem Cell Research
• ☆ Data Analysis
• ☆ Social Network Analysis
• ☆ Predictive Modeling & Analytics
• ☆ Data Processing
• ☆ Data Exploration
• ☆ Cluster Analysis
• ☆ Data Visualization
• ☆ Big Data Analytics
• ☆ Data Collection
• ☆ Data Management
• ☆ Data Manipulation
• ☆ Machine Learning
• ☆ Text Mining & Analytics
• ☆ Data Mining
• ☆ Data Cleaning
• ☆ Data Architecture
• ☆ Neural Networks
• ☆ Artificial Intelligence
• ☆ Deep Learning
• ☆ Statistics
• ☆ Bioinformatics
• ☆ Gene & Protein Expression Analysis
• ☆ Systems Biology
• ☆ Cell Culture
• ☆ Cell Aging

Services

• Writing
• Research
• Consulting
• Data & AI

Writing Medical Writing, Technical Writing

Research Scientific and Technical Research

Consulting Scientific and Technical Consulting

Data & AI Statistical Analysis, Data Visualization, Data Processing

Work Experience

Bioinformatician

Royan Institute for Reproductive Biomedicine, Stem Cell Biology and Technology

October 2022 - Present

Field Technical Sales Specialist

ROJE Technologies

April 2024 - November 2024

Laboratory Assistant

Parsteb Lab

March 2022 - August 2022

Education

Stem Cells and Regeneration MSc

Royan institute for Stem Cell Biology and Technology

October 2022 - October 2025

BSc in Biotechnology

Kharazmi University

October 2018 - October 2021

Certifications

• INTRODUCTION OF THE COVID-19 AND VACCINES

  tehran university

  August 2022 - October 2022

• Introductory introduction to R programming

  tehran university

  June 2019 - November 2019

• Crisper; Bacterial Immune System and Its Application for Genomic Editing

  tehran university

  April 2018 - May 2018

Publications

JOURNAL ARTICLE

Amir Ali Judaki, Mohammad Shirinpoor, Masoumeh Farahani, Tahmineh Aldaghi, Afsaneh Arefi-Oskouie, Elham Nazari (2025). Bioinformatics and machine learning reveal novel prognostic biomarkers in head and neck squamous cell carcinoma . Journal of Applied Genetics.