Profile Details

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USD 100 /hr

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Hire Dr. Zachary R.

United States

USD 100 /hr

Molecular Modeling and Cheminformatics: Protein-Ligand, Protein-Protein, Protein-Membrane Interactions

Profile Summary

Technical Skills: - Molecular dynamics (MD) simulations utilizing Gromacs and CHARMM Packages - Identification of dynamic structure-function relationships utilizing machine learning packages Pytorch and sklearn - Steered molecular dynamics (SMD) simulations: protein-ligand free energy calculations via umbrella sampling (US), protein-protein potential mean force calculations - Homology modeling of proteins via Modeller or AlphaFold2 - Protein glycosylation modeling via Glycam - Biomembrane modeling and protein embedding via CHARMM - Conformational analysis via fluctuation, gyration, secondary structure, principal component analysis Professional Expertise: - T Cell Receptor - B Cell Receptor

Subject Matter Expertise

• ★ Molecular Modeling
• ☆ Computational Chemistry
• ☆ Protein/Enzyme Engineering

Services

• Writing
• Research
• Consulting
• Data & AI
• Product Development

Writing Technical Writing

Research Market Research, Feasibility Study, Fact Checking, Systematic Literature Review

Consulting Scientific and Technical Consulting

Data & AI Predictive Modeling, Statistical Analysis, Algorithm Design-Non ML, Data Visualization, Big Data Analytics, Data Processing, Data Insights

Product Development Product Validation, Concept Development

Work Experience

Research & Development Intern

Assembly Biosciences, Inc.

July 2016 - May 2017

Education

PhD Chemical Engineering

University of California, Davis

August 2018 - June 2022

Certifications

• Certification details not provided.