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★★★★★
☆☆☆☆☆
USD 300 /hr
Hire Dr. Yanbo P.
Sweden
USD 300 /hr

Proteomics Consultant & Cancer Research Scientist | Expert in Subcellular Localization & Multi-Omics Integration

Profile Summary
Subject Matter Expertise
Services
Writing Creative Writing
Research Market Research, User Research, Technology Scouting, Scientific and Technical Research, Systematic Literature Review
Consulting Scientific and Technical Consulting
Data & AI Predictive Modeling, Statistical Analysis, Image Analysis, Data Visualization, Big Data Analytics, Text Mining & Analytics, Data Mining, Data Cleaning, Data Processing
Work Experience

Senior Research Specialist

Karolinska Institutet

January 2023 - Present

Researcher (Forskare in Swedish)

Karolinska Institutet

June 2020 - January 2023

Postdoc

Karolinska Institutet

October 2015 - June 2020

Postdoc

Science for Life Laboratory

October 2015 - June 2020

Education

Doctor of Philosophy (Department of Biotechnology )

Dalian Institute of Chemical Physics, Chinese Academy of Sciences

September 2009 - July 2015

Certifications
  • Certification details not provided.
Publications
JOURNAL ARTICLE
Yanbo Pan, Taner Arslan, Georgios Mermelekas, Mattias Vesterlund, Lukas M. Orre, Janne Lehtiö (2022). SubCellBarCode: integrated workflow for robust spatial proteomics by mass spectrometry . Nature Protocols.
Arslan, T., Pan, Y., Mermelekas, G., Vesterlund, M., Orre, L.M., Lehtiö, J.(2022). SubCellBarCode: integrated workflow for robust spatial proteomics by mass spectrometry . Nature Protocols. 17. (8). p. 1832-1867.
Yanbo Pan, Janne Lehtiö, Taner Arslan, Ioannis Siavelis, Fabio Socciarelli, Olena Berkovska, Husen M. Umer, Georgios Mermelekas, Mohammad Pirmoradian, Mats Jönsson, et al. (2021). Proteogenomics of non-small cell lung cancer reveals molecular subtypes associated with specific therapeutic targets and immune-evasion mechanisms . Nature Cancer.
Subcellular proteomics <head> <META HTTP-EQUIV="Refresh" CONTENT="0;URL=/servlet/useragent"> </head> . Nature Reviews Methods Primers.
Josie A. Christopher and Charlotte Stadler and Claire E. Martin and Marcel Morgenstern and Yanbo Pan and Cora N. Betsinger and David G. Rattray and Diana Mahdessian and Anne-Claude Gingras and Bettina Warscheid and Janne Lehtiö and Ileana M. Cristea and Leonard J. Foster and Andrew Emili and Kathryn S. Lilley(2021). Subcellular proteomics . Nature Reviews Methods Primers. 1. (1). Springer Science and Business Media {LLC}
Christopher, J.A., Stadler, C., Martin, C.E., Morgenstern, M., Pan, Y., Betsinger, C.N., Rattray, D.G., Mahdessian, D., Gingras, A.-C., Warscheid, B., et al.(2021). Subcellular proteomics . Nature Reviews Methods Primers. 1. (1).
Lehti&#246;, J., Arslan, T., Siavelis, I., Pan, Y., Socciarelli, F., Berkovska, O., Umer, H.M., Mermelekas, G., Pirmoradian, M., J&#246;nsson, M., et al.(2021). Proteogenomics of non-small cell lung cancer reveals molecular subtypes associated with specific therapeutic targets and immune-evasion mechanisms . Nature Cancer. 2. (11). p. 1224-1242.
Omid Fotouhi and Hanna Kjellin and C. Christofer Juhlin and Yanbo Pan and Mattias Vesterlund and Mehran Ghaderi and Abdelhamid Yousef and Hillevi Andersson-Sand and Pedram Kharaziha and Stefano Caramuta and Magnus Kjellman and Jan Zedenius and Catharina Larsson and Lukas M. Orre(2019). Proteomics identifies neddylation as a potential therapy target in small intestinal neuroendocrine tumors . Oncogene. 38. (43). p. 6881--6897. Springer Science and Business Media {LLC}
(2019). SubCellBarCode: Proteome-wide Mapping of Protein Localization and Relocalization . Molecular Cell.
Orre, L.M., Vesterlund, M., Pan, Y., Arslan, T., Zhu, Y., Fernandez Woodbridge, A., Frings, O., Fredlund, E., Lehti&#246;, J.(2019). SubCellBarCode: Proteome-wide Mapping of Protein Localization and Relocalization . Molecular Cell. 73. (1). p. 166-182.e7.
Fotouhi, O., Kjellin, H., Juhlin, C.C., Pan, Y., Vesterlund, M., Ghaderi, M., Yousef, A., Andersson-Sand, H., Kharaziha, P., Caramuta, S., et al.(2019). Proteomics identifies neddylation as a potential therapy target in small intestinal neuroendocrine tumors . Oncogene. 38. (43). p. 6881-6897.
Pan, Yanbo, Zhang, Yixin, Liu, Wujun, Zhou, Yongjin J., Wang, Keyun, Wang, Lei, Sohail, Muhammad, Ye, Mingliang, Zou, Hanfa, Zhao, Zongbao K.(2016). In vivo protein allylation to capture protein methylation candidates . Chemical Communications. 52. (40). p. 6689-6692.
Zhang, Y, Pan, Y, Liu, W, Zhou, YJ, Wang, K, Wang, L, Sohail, M, Ye, M, Zou, H, Zhao, ZK (2016). In vivo protein allylation to capture protein methylation candidates . Chem. Commun. (Camb.).
Zhang, Y., Pan, Y., Liu, W., Zhou, Y.J., Wang, K., Wang, L., Sohail, M., Ye, M., Zou, H., Zhao, Z.K.(2016). In vivo protein allylation to capture protein methylation candidates . Chemical Communications. 52. (40). p. 6689-6692.
Liu Fang-Jie, Ye Ming-Liang, Pan Yan-Bo, Zou Han-Fa(2015). High Concentration Trypsin Assisted Fast In-Gel Digestion for Phosphoproteome Analysis . Chinese Journal of Analytical Chemistry. 43. (10). p. 1452-1458.
Liu, FJ, Ye, ML, Pan, YB, Zou, HF (2015). High Concentration Trypsin Assisted Fast In-Gel Digestion for Phosphoproteome Analysis . Chin. J. Anal. Chem.
Liu, F.-J., Ye, M.-L., Pan, Y.-B., Zou, H.-F.(2015). High concentration trypsin assisted fast in-gel digestion for phosphoproteome analysis . Chinese Journal of Analytical Chemistry. 43. (10). p. 1452-1458.
Pan, Yanbo, Yao, Yating, Huang, Junfeng, Cheng, Kai, Qin, Hongqiang, Ye, Mingliang, Zou, Hanfa(2015). Specific Enrichment of Peptides with N-Terminal Serine/Threonine by a Solid-Phase Capture-Release Approach for Efficient Proteomics Analysis . Analytical Chemistry. 87. (22). p. 11353-11360.
Yao, Y, Huang, J, Cheng, K, Pan, Y, Qin, H, Ye, M, Zou, H (2015). Specific Enrichment of Peptides with N-Terminal Serine/Threonine by a Solid-Phase Capture-Release Approach for Efficient Proteomics Analysis . Anal. Chem.
Yao, Y., Huang, J., Cheng, K., Pan, Y., Qin, H., Ye, M., Zou, H.(2015). Specific Enrichment of Peptides with N-Terminal Serine/Threonine by a Solid-Phase Capture-Release Approach for Efficient Proteomics Analysis . Analytical Chemistry. 87. (22). p. 11353-11360.
Pan, Yanbo, Mao, Jiawei, Deng, Zhenzhen, Dong, Mingming, Bian, Yangyang, Ye, Mingliang, Zou, Hanfa(2015). The proteomic analysis improved by cleavage kinetics-based fractionation of tryptic peptides . Proteomics. 15. (21). p. 3613-3616.
Pan, Y, Mao, J, Deng, Z, Dong, M, Bian, Y, Ye, M, Zou, H (2015). The proteomic analysis improved by cleavage kinetics-based fractionation of tryptic peptides . Proteomics.
Pan, Y., Mao, J., Deng, Z., Dong, M., Bian, Y., Ye, M., Zou, H.(2015). The proteomic analysis improved by cleavage kinetics-based fractionation of tryptic peptides . Proteomics. 15. (21). p. 3613-3616.
Zheng, H., Mao, J., Pan, Y., Liu, Z., Liu, Z., Ye, M., Zou, H.(2014). Effect of the lysine guanidination on proteomic analysis . Chinese Journal of Chromatography (Se Pu). 32. (4). p. 376-380.
Pan, Yanbo, Liu, Fangjie, Ye, Mingliang, Zhang, Yi, Bian, Yangyang, Sun, Zhen, Zhu, Jun, Cheng, Kai, Zou, Hanfa(2014). Integration of Cell Lysis, Protein Extraction, and Digestion into One Step for Ultrafast Sample Preparation for Phosphoproteome Analysis . Analytical Chemistry. 86. (14). p. 6786-6791.
Liu, F, Ye, M, Pan, Y, Zhang, Y, Bian, Y, Sun, Z, Zhu, J, Cheng, K, Zou, H (2014). Integration of cell lysis, protein extraction, and digestion into one step for ultrafast sample preparation for phosphoproteome analysis . Anal. Chem.
Liu, F., Ye, M., Pan, Y., Zhang, Y., Bian, Y., Sun, Z., Zhu, J., Cheng, K., Zou, H.(2014). Integration of cell lysis, protein extraction, and digestion into one step for ultrafast sample preparation for phosphoproteome analysis . Analytical Chemistry. 86. (14). p. 6786-6791.
Pan, Yanbo, Ye, Mingliang, Cheng, Kai, Zou, Hanfa(2014). Protein digestion priority is independent of protein abundances . Nature Methods. 11. (3). p. 220-222.
Ye, M, Pan, Y, Cheng, K, Zou, H (2014). Protein digestion priority is independent of protein abundances . Nat. Methods.
Ye, M., Pan, Y., Cheng, K., Zou, H.(2014). Protein digestion priority is independent of protein abundances . Nature Methods. 11. (3). p. 220-222.
Pan, Yanbo, Cheng, Kai, Mao, Jiawei, Liu, Fangjie, Liu, Jing, Ye, Mingliang, Zou, Hanfa(2014). Quantitative proteomics reveals the kinetics of trypsin-catalyzed protein digestion . Analytical and Bioanalytical Chemistry. 406. (25). p. 6247-6256.
Pan, Y, Cheng, K, Mao, J, Liu, F, Liu, J, Ye, M, Zou, H (2014). Quantitative proteomics reveals the kinetics of trypsin-catalyzed protein digestion . Anal Bioanal Chem.
Pan, Y., Cheng, K., Mao, J., Liu, F., Liu, J., Ye, M., Zou, H.(2014). Quantitative proteomics reveals the kinetics of trypsin-catalyzed protein digestion . Analytical and Bioanalytical Chemistry. 406. (25). p. 6247-6256.
Pan, Yanbo, Ye, Mingliang, Zheng, Hao, Cheng, Kai, Sun, Zhen, Liu, Fangjie, Liu, Jing, Wang, Keyun, Qin, Hongqiang, Zou, Hanfa(2014). Trypsin-Catalyzed N-Terminal Labeling of Peptides with Stable Isotope-Coded Affinity Tags for Proteome Analysis . Analytical Chemistry. 86. (2). p. 1170-1177.
Pan, Y, Ye, M, Zheng, H, Cheng, K, Sun, Z, Liu, F, Liu, J, Wang, K, Qin, H, Zou, H (2014). Trypsin-catalyzed N-terminal labeling of peptides with stable isotope-coded affinity tags for proteome analysis . Anal. Chem.
Pan, Y., Ye, M., Zheng, H., Cheng, K., Sun, Z., Liu, F., Liu, J., Wang, K., Qin, H., Zou, H.(2014). Trypsin-catalyzed N-terminal labeling of peptides with stable isotope-coded affinity tags for proteome analysis . Analytical Chemistry. 86. (2). p. 1170-1177.
Zheng, H, Mao, J, Pan, Y, Liu, Z, Liu, Z, Ye, M, Zou, H (2014). [Effect of the lysine guanidination on proteomic analysis] . Se Pu.
Pan, Yanbo, Zheng, Hao, Mao, Jiawei, Liu, Zhongshan, Liu, Zheyi, Ye, Mingliang, Zou, Hanfa(2014). [Effect of the lysine guanidination on proteomic analysis] . Se pu = Chinese journal of chromatography / Zhongguo hua xue hui. 32. (4). p. 376-80.
Pan, Yanbo, Bian, Yangyang, Ye, Mingliang, Wang, Chunli, Cheng, Kai, Song, Chunxia, Dong, Mingming, Qin, Hongqiang, Zou, Hanfa(2013). Global Screening of CK2 Kinase Substrates by an Integrated Phosphoproteomics Workflow . Scientific Reports. 3.
Bian, Y, Ye, M, Wang, C, Cheng, K, Song, C, Dong, M, Pan, Y, Qin, H, Zou, H (2013). Global screening of CK2 kinase substrates by an integrated phosphoproteomics workflow . Sci Rep.
Bian, Y., Ye, M., Wang, C., Cheng, K., Song, C., Dong, M., Pan, Y., Qin, H., Zou, H.(2013). Global screening of CK2 kinase substrates by an integrated phosphoproteomics workflow . Scientific Reports. 3.
Pan, Yanbo, Ye, Mingliang, Zhao, Liang, Cheng, Kai, Dong, Mingming, Song, Chunxia, Qin, Hongqiang, Wang, Fangjun, Zou, Hanfa(2013). N-Terminal Labeling of Peptides by Trypsin-Catalyzed Ligation for Quantitative Proteomics . Angewandte Chemie-International Edition. 52. (35). p. 9205-9209.
Pan, Y, Ye, M, Zhao, L, Cheng, K, Dong, M, Song, C, Qin, H, Wang, F, Zou, H (2013). N-terminal labeling of peptides by trypsin-catalyzed ligation for quantitative proteomics . Angew. Chem. Int. Ed. Engl.
Pan, Y., Ye, M., Zhao, L., Cheng, K., Dong, M., Song, C., Qin, H., Wang, F., Zou, H.(2013). N-terminal labeling of peptides by trypsin-catalyzed ligation for quantitative proteomics . Angewandte Chemie - International Edition. 52. (35). p. 9205-9209.
Pan, Yanbo, Zhang, Yixin, Yang, Wei, Liu, Wujun, Zou, Hanfa, Zhao, Zongbao K.(2013). Protein Arginine Allylation and Subsequent Fluorophore Targeting . Chembiochem. 14. (12). p. 1438-1443.
Zhang, Y, Pan, Y, Yang, W, Liu, W, Zou, H, Zhao, ZK (2013). Protein arginine allylation and subsequent fluorophore targeting . Chembiochem.
Zhang, Y., Pan, Y., Yang, W., Liu, W., Zou, H., Zhao, Z.K.(2013). Protein arginine allylation and subsequent fluorophore targeting . ChemBioChem. 14. (12). p. 1438-1443.
Pan, Yanbo, Dong, Mingming, Ye, Mingliang, Cheng, Kai, Song, Chunxia, Wang, Chunli, Bian, Yangyang, Zou, Hanfa(2012). Depletion of Acidic Phosphopeptides by SAX To Improve the Coverage for the Detection of Basophilic Kinase Substrates . Journal of Proteome Research. 11. (9). p. 4673-4681.
Dong, M, Ye, M, Cheng, K, Song, C, Pan, Y, Wang, C, Bian, Y, Zou, H (2012). Depletion of acidic phosphopeptides by SAX to improve the coverage for the detection of basophilic kinase substrates . J. Proteome Res.
Dong, M., Ye, M., Cheng, K., Song, C., Pan, Y., Wang, C., Bian, Y., Zou, H.(2012). Depletion of acidic phosphopeptides by SAX to improve the coverage for the detection of basophilic kinase substrates . Journal of Proteome Research. 11. (9). p. 4673-4681.
Wang, Xiu-Li, Huang, Yan, Zhu, Jiang, Pan, Yan-Bo, He, Rui, Wang, Yu-Zhong(2009). Chitosan-graft poly(p-dioxanone) copolymers: preparation, characterization, and properties . Carbohydrate Research. 344. (6). p. 801-807.
Wang, XL, Huang, Y, Zhu, J, Pan, YB, He, R, Wang, YZ (2009). Chitosan-graft poly(p-dioxanone) copolymers: preparation, characterization, and properties . Carbohydr. Res.
Liu, Gui-Ying, Zhai, Yan-Li, Wang, Xiu-Li, Wang, Wen-Tao, Pan, Yan-Bo, Dong, Xue-Ting, Wang, Yu-Zhong(2008). Preparation, characterization, and in vitro drug release behavior of biodegradable chitosan-graft-poly(1, 4-dioxan-2-one) copolymer . Carbohydrate Polymers. 74. (4). p. 862-867.
Liu, GY, Zhai, YL, Wang, XL, Wang, WT, Pan, YB, Dong, XT, Wang, YZ (2008). Preparation, characterization, and in vitro drug release behavior of biodegradable chitosan-graft-poly(1, 4-dioxan-2-one) copolymer . Carbohydr. Polym.