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Hire Dr. Vitor C.

Brazil

USD 50 /hr

Bionformatics Researcher and RD&I Consultant

Profile Summary

I am a researcher and consultant in Bioinformatics, particularly in Functional Genomics and application/development of techniques and tools for large-scale data analysis of second and third generation DNA and RNA sequencing (genome/transcriptome assembly; RNA-Seq data analysis; Functional analysis; and others). I am a computer scientist with Ph.D. and post-doctorate in Biological Sciences, with an emphasis on transcriptomics of model and non-model organisms.

Subject Matter Expertise

• ★ Transcriptomics
• ★ Next Generation Sequencing (NGS)
• ★ Bioinformatics
• ☆ Computational Biology
• ☆ Molecular Biology
• ☆ Genetics
• ☆ Omics
• ☆ DNA Sequencing
• ☆ Genome Sequencing
• ☆ RNA Sequencing
• ☆ Computer Science
• ☆ Data Science
• ☆ Data Analysis
• ☆ R

Services

• Writing
• Research
• Consulting
• Data & AI
• Product Development

Writing Technical Writing, Translation

Research Scientific and Technical Research

Consulting Scientific and Technical Consulting

Data & AI Statistical Analysis, Data Visualization, Data Cleaning, Data Processing

Product Development Formulation

Work Experience

Researcher consultant

SENAI CETIQT

October 2020 - Present

Researcher Consultant

Centro de Tecnologia da Indústria Química e Têxtil

October 2020 - Present

Postdoc position

Federal University of Rio de Janeiro

October 2020 - September 2021

Professor

Federal University of Rio de Janeiro

March 2020 - June 2021

Professor

Universidade Federal do Rio de Janeiro Editora UFRJ

2020 - 2021

Education

PhD (Bioinformatics) (Instituto de Biofísica Carlos Chagas Filho)

Universidade Federal do Rio de Janeiro

2015 - April 2019

Master (Bioinformatics)

Laboratório Nacional de Computação Científica

2013 - 2015

Bacharelor (Computer Science)

Universidade Federal do Pará

2008 - 2013

Certifications

• Certification details not provided.

Publications

JOURNAL ARTICLE

Vitor Lima Coelho and Tarc{\'{\i}}sio Fontenele de Brito and Ingrid Alexandre de Abreu Brito and Maira Arruda Cardoso and Mateus Antonio Berni and Helena Maria Marcolla Araujo and Michael Sammeth and Attilio Pane(2021). Analysis of ovarian transcriptomes reveals thousands of novel genes in the insect vector Rhodnius prolixus . Scientific Reports. 11. (1). Springer Science and Business Media {LLC}

Tarcísio Fontenele de Brito, Mark D. Stenglein, Vitor Lima Coelho, Maira Arruda Cardoso, Ingrid Alexandre de Abreu Brito, Mateus Antonio Berni, Fides Lea Zenk, Nicola Iovino, Attilio Pane (2021). Transovarial transmission of a core virome in the Chagas disease vector Rhodnius prolixus . PLOS Pathogens.

Coelho, V.L., de Brito, T.F., de Abreu Brito, I.A., Cardoso, M.A., Berni, M.A., Araujo, H.M.M., Sammeth, M., Pane, A.(2021). Analysis of ovarian transcriptomes reveals thousands of novel genes in the insect vector Rhodnius prolixus . Scientific Reports. 11. (1).

(2020). Gene expression profiling of Trypanosoma cruzi in the presence of heme points to glycosomal metabolic adaptation of epimastigotes inside the vector . PLOS Neglected Tropical Diseases.

Paes, M.C., Saraiva, F.M.S., Nogueira, N.P., Vieira, C.S.D., Dias, F.A., Rossini, A., Coelho, V.L., Pane, A., Sang, F., Alcocer, M.(2020). Gene expression profiling of trypanosoma cruzi in the presence of heme points to glycosomal metabolic adaptation of epimastigotes inside the vector . PLoS Neglected Tropical Diseases. 14. (1). p. 1-14.

(2018). An automated method for detecting alternatively spliced protein domains .

Vitor Coelho, Michael Sammeth, Alfonso Valencia(2018). An automated method for detecting alternatively spliced protein domains . Bioinformatics. Oxford University Press ({OUP})

Coelho, V., Sammeth, M.(2018). An automated method for detecting alternatively spliced protein domains . Bioinformatics. 34. (22). p. 3809-3816.

OTHER

Tarcísio Fontenele de Brito, Vitor Lima Coelho, Maira Arruda Cardoso, Ingrid Alexandre de Abreu Brito, Fides Lea Zenk, Nicola Iovino, Attilio Pane(2020). Transovarial transmission fuels persistent infections of a core virome in the Chagas disease vector Rhodnius prolixus . Cold Spring Harbor Laboratory

Coelho, V.L., de Brito, T.F., de Abreu Brito, I.A., Cardoso, M.A., Berni, M.A., Araujo, H.M.M., Sammeth, M., Pane, A.(2020). Analysis of ovarian transcriptomes reveals thousands of novel genes in the insect vector Rhodnius prolixus . bioRxiv.

de Brito, T.F., Coelho, V.L., Cardoso, M.A., de Abreu Brito, I.A., Zenk, F.L., Iovino, N., Pane, A.(2020). Transovarial transmission fuels persistent infections of a core virome in the Chagas disease vector Rhodnius prolixus . bioRxiv.

CONFERENCE PAPER

Cardoso, P., Santos, R., Lima, M., Sales, C., Kawasaki, R., Coelho, V.L.(2016). Identification of ubiquitylation sites through nondominated sorting genetic algorithm II . Proceedings of the 8th International Conference on Bioinformatics and Computational Biology, BICOB 2016. p. 37-42.

Coutinho, R.W.L., Coelho, V.L., Costa, J.C.W.A., Carvalho, G.H.S.(2010). Optimal policy for Joint Call Admission Control in next generation wireless networks . Proceedings of the 2010 International Conference on Network and Service Management, CNSM 2010. p. 214-217.