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Hire Dr. Vadim P.

France

USD 50 /hr

Algorithms for data analysis and predictive modeling

Profile Summary

Developing algorithms for data analysis and predictive modeling (Markov models, hidden Markov models, principle component analysis (PCA), multivariate regression, logistic regression, robust regression, Bayesian modeling, graphical models, time series, Monte Carlo, hierarchical clustering)

Subject Matter Expertise

• ★ Data Analysis
• ★ Mathematical Models
• ★ Python
• ☆ Computational Biology
• ☆ Biophysics
• ☆ Bioinformatics
• ☆ Physics
• ☆ Computational Physics

Services

• Data & AI

Data & AI Statistical Analysis, Algorithm Design-Non ML, Data Visualization

Work Experience

Postdoc

Universität Basel Department Biozentrum

March 2017 - Present

Bioinformatician

OmicX

September 2018 - March 2019

Researcher in Pathogen evolution, genomics and biophysics group

Biozentrum of Basel University (Basel, Switzerland)

March 2017 - February 2018

Researcher in Pathogen evolution, genomics and biophysics group

Max Planck Institute for Developmental Biology (Tübingen, Germany)

June 2014 - February 2017

Researcher in Quantum transport and nano-electro-mechanical systems group

Université Bordeaux (Bordeaux, France)

May 2011 - February 2014

Researcher in Theoretical condensed matter physics group

Ben-Gurion University (Beer Sheva, Israel)

October 2006 - April 2011

Researcher in Nanoscience group

Lehigh University (Bethlehem, PA, USA)

June 2005 - May 2006

Researcher in Optics and condensed matter theory group

Researcher at Qeens College of CUNY (Flushing, NY, USA)

June 2004 - May 2005

Education

PhD

Stevens Institute of Technology (Hoboken, NJ, USA)

August 2000 - May 2004

Certifications

• Certification details not provided.

Publications

JOURNAL ARTICLE

Vadim Puller, Claus O. Wilke, Richard Neher, Jan Albert(2017). Estimating time of {HIV}-1 infection from next-generation sequence diversity . {PLOS} Computational Biology. 13. (10). p. e1005775. Public Library of Science ({PLoS})

Zanini, Fabio and Puller, Vadim and Brodin, Johanna and Albert, Jan and Neher, Richard A.(2017). In vivo mutation rates and the landscape of fitness costs of HIV-1 . Virus Evolution. 3. (1). p. vex003.

Defoort, M. and Puller, V. and Bourgeois, O. and Pistolesi, F. and Collin, E.(2015). Scaling laws for the bifurcation escape rate in a nanomechanical resonator . Phys. Rev. E. 92. p. 050903. American Physical Society

Meir, Y., Puller, V. I.(2010). How to measure the transmission phase through a quantum dot in a two-terminal interferometer. Phys Rev Lett. 104. (25). p. 256801.

ENSSLIN, K, IHN, T, MEIR, Y, PULLER, V, SIGRIST, M(2009). Breaking of phase symmetry in nonequilibrium Aharonov-Bohm oscillations through a quantum dot . PHYSICAL REVIEW B. 80. (3).

MEIR, Y, PULLER, VI(2008). Phase switching in a voltage-biased Aharonov-Bohm interferometer . PHYSICAL REVIEW B. 77. (16).

PULLER, VI, ROTKIN, SV(2007). Helicity and broken symmetry of DNA-nanotube hybrids . EPL. 77. (2).

DEYCH, LI, EREMENTCHOUK, MV, LISYANSKY, AA, PULLER, VI(2005). Screening of external electric field by photoinduced carriers in Bragg multiple quantum wells . APPLIED PHYSICS LETTERS. 87. (5).

BIRD, JP, MOUROKH, LG, PULLER, VI, SMIRNOV, AY(2005). Readout of single spins via Fano resonances in quantum point contacts . APPLIED PHYSICS LETTERS. 87.

BIRD, JP, MOUROKH, LG, OCHIAI, Y, PULLER, VI(2005). Influence of magnetic moment formation on the conductance of coupled quantum wires . JOURNAL OF PHYSICS-CONDENSED MATTER. 17. (34). p. 5269-5284.

BIRD, JP, MOUROKH, LG, PULLER, VI, SHAILOS, A(2005). Electron dynamics in a coupled quantum-point contact structure with a local magnetic moment . IEEE TRANSACTIONS ON NANOTECHNOLOGY. 4. (1). p. 21-26.

BIRD, JP, MOUROKH, LG, PULLER, VI, SHAILOS, A(2004). Detection of local-moment formation using the resonant interaction between coupled quantum wires . PHYSICAL REVIEW LETTERS. 92. (9).

Puller, Vadim I. and Mourokh, Lev G. and Horing, Norman J. M. and Smirnov, Anatoly Yu.(2003). Electron spin relaxation in a semiconductor quantum well . Phys. Rev. B. 67. p. 155309. American Physical Society

HORING, NJM, MOUROKH, LG, PULLER, VI, SMIRNOV, AY(2003). Electron spin relaxation in a semiconductor quantum well . PHYSICAL REVIEW B. 67. (15).

Puller, Vadim I. and Mourokh, Lev G. and Horing, Norman J. M. and Smirnov, Anatoly Yu.(2003). Electron spin relaxation in a semiconductor quantum well . Phys. Rev. B. 67. p. 155309. American Physical Society

Horing, Norman J. M. and Puller, Vadim I. and Mourokh, Lev G. and Romanov, Yuriy A.(2002). Green's function for a Schrödinger electron in a one-dimensional superlattice miniband with axial electric and magnetic fields . Phys. Rev. B. 66. p. 035304. American Physical Society

HORING, NJM, MOUROKH, LG, PULLER, VI, ROMANOV, YA(2002). Green's function for a Schrodinger electron in a one-dimensional superlattice miniband with axial electric and magnetic fields . PHYSICAL REVIEW B. 66. (3).

Horing, N. J. M., Mourokh, L. G., Puller, V. I., Smirnov, A. Y.(2001). Dephasing in one-dimensional quantum systems as a result of ensemble averaging . Physics Letters A. 288. (1). p. 49-52.

HORING, NJM, MOUROKH, LG, PULLER, VI, SMIRNOV, AY(2001). Wave packet dynamics in a semiconductor superlattice. PHYSICS LETTERS A. 281. (1). p. 70-75.

TreeTime: maximum likelihood phylodynamic analysis .

OTHER

Vadim Puller, Richard Neher, Jan Albert(2017). Estimating Time Of {HIV}-1 Infection From Next-Generation Sequence Diversity . Cold Spring Harbor Laboratory

Puller, Vadim, Lounis, Brahim, Pistolesi, Fabio(2013). Single Molecule Detection of Nanomechanical Motion .