Profile Details

Create Project

★★★★★

☆☆☆☆☆

★★★★★

☆☆☆☆☆

Hire Dr. Slimane K.

Morocco

Researcher at INRA

Profile Summary

I’m Bioinformatician working on big data from eukaryotes and prokaryotes genomes, trying to decipher multiple aspects in term of evolution, pathogeny, interactions. I’m interested in next-generation sequencing projects that include genome assemblyand annotation, variant discovery, phylogenomics, metagenomics, genotyping and differential gene expression analysis (RNA-Seq).

Subject Matter Expertise

• ☆ Microbiology
• ☆ Molecular Biology
• ☆ Genetics
• ☆ Genomics
• ☆ Next Generation Sequencing (NGS)
• ☆ RNA Sequencing
• ☆ Biotechnology & Bioengineering
• ☆ Big Data Analytics

Services

• Writing
• Consulting
• Data & AI
• Product Development

Work Experience

Researcher

Institute of Integrative Biology of the Cell

January 2016 - December 2016

Phd Student

Institut des Sciences du végétal

May 2012 - September 2015

Education

PhD

Université Paris-Saclay

April 2013 - December 2015

Certifications

• Certification details not provided.

Publications

JOURNAL ARTICLE

(2020). Diversity of Pectobacteriaceae Species in Potato Growing Regions in Northern Morocco . Microorganisms.

(2020). Diversity of Pectobacteriaceae Species in Potato Growing Regions in Northern Morocco . Microorganisms.

Khayi S, Azza NE, Gaboun F et al. First draft genome assembly of the Argane tree (Argania spinosa) [version 2; peer review: 2 approved] F1000Research 2020, 7:1310 (https://doi.org/10.12688/f1000research.15719.2) .

Khayi S, Azza NE, Gaboun F et al. First draft genome assembly of the Argane tree (Argania spinosa) [version 1; referees: awaiting peer review] F1000Research 2018, 7:1310 (doi: 10.12688/f1000research.15719.1) .

Khayi S, Blin P, Chong TM, Robic K, Chan KG, Faure D(2018). Complete Genome Sequences of the Plant Pathogens Dickeya solani RNS 08.23.3.1.A and Dickeya dianthicola RNS04.9 . Genome announcements.

(2017). Phylogenetic analysis of avian infectious bronchitis virus isolates from Morocco: a retrospective study (1983 to 2014) . Virologica Sinica. 32. (2). p. 155-158.

(2017). First report of Dickeya dianthicola causing blackleg disease on potato in Morocco . Plant Disease. 101. (9).

(2016). Transfer of the potato plant isolates of Pectobacterium wasabiae to pectobacterium parmentieri sp. nov . International Journal of Systematic and Evolutionary Microbiology. 66. (12). p. 5379-5383.

Khayi, S., Blin, P., Chong, T.M., Chan, K.-G., Faure, D.(2016). Complete genome anatomy of the emerging potato pathogen Dickeya solani type strain IPO 2222^T . Standards in Genomic Sciences. 11. (1).

Khayi, S., Blin, P., Pédron, J., Chong, T.-M., Chan, K.-G., Moumni, M., Hélias, V., Van Gijsegem, F., Faure, D.(2015). Population genomics reveals additive and replacing horizontal gene transfers in the emerging pathogen Dickeya solani . BMC Genomics. 16. (1).

(2015). Phylogenetic analysis of avian infectious bronchitis virus S1 glycoprotein regions reveals emergence of a new genotype in Moroccan broiler chicken flocks . Virology Journal. 12. (1).

(2015). Genomic overview of the phytopathogen Pectobacterium wasabiae strain RNS 08.42.1A suggests horizontal acquisition of quorum-sensing genes . Genetica. 143. (2). p. 241-252.

(2014). Genome Sequence of the Emerging Plant Pathogen Dickeya solani Strain RNS 08.23.3.1A . Genome announcements.

(2014). Genome sequence of the emerging plant pathogen Dickeya solani strain RNS 08.23.3.1A . Genome Announcements. 2. (1).