Profile Details

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Hire Nicolas B.

Mali

USD 50 /hr

Data analyst 10+ years expertise | Expert in R | PhD

Profile Summary

As a PhD in bioinformatics, I have wide experience on data analysis, gained from 18 years of experience, including 7 years as a consultant. My expertise cover data pre-processing, analysis and visualisation, as well as machine learning I emphasis a proper evaluation of the project, commitment to tackle the different problems and quality of communication with the customer. If these values are also yours, let's talk and see what your needs are !

Subject Matter Expertise

• ☆ Microbiology
• ☆ Microbiome Research
• ☆ Molecular Biology
• ☆ Omics
• ☆ Genomics
• ☆ Data Analysis
• ☆ Algorithm Design
• ☆ Data Processing
• ☆ Data Exploration
• ☆ Data Visualization
• ☆ Data Manipulation
• ☆ Machine Learning
• ☆ Data Cleaning
• ☆ Statistics
• ☆ Health Data Analysis
• ☆ Bioinformatics
• ☆ Gene & Protein Expression Analysis
• ☆ R

Services

• Consulting
• Data & AI
• Product Development

Consulting Healthcare Consulting, Scientific and Technical Consulting

Data & AI Predictive Modeling, Statistical Analysis, Algorithm Design-Non ML, Algorithm Design-ML, Data Visualization, Data Mining, Data Cleaning, Data Processing, Data Insights

Product Development Concept Development, Prototyping

Work Experience

Freelance consultant

Brain In Silico

September 2015 - Present

research officer

University of Cape Town

October 2020 - September 2022

Senior bioinformatician

UCT

February 2019 - May 2020

Research Engineer

Brain and Spine Institute

September 2017 - August 2018

Expert bioinformatician

University of Luxembourg

March 2013 - August 2014

Postdoctoral fellow

Institut Pasteur

June 2011 - February 2013

Postdoctoral fellow

CSIR Institute of Genomics & Integrative Biology

February 2009 - May 2011

Education

PhD

Université de Nantes

September 2004 - June 2008

Certifications

• Certification details not provided.

Publications

JOURNAL ARTICLE

Anca Flavia Savulescu, Emmanuel Bouilhol, Nicolas Beaume, Macha Nikolski (2021). Prediction of RNA subcellular localization: learning from heterogeneous data sources . iScience.

Anca F. Savulescu, Robyn Brackin, Emmanuel Bouilhol, Benjamin Dartigues, Jonathan H. Warrell, Mafalda R. Pimentel, Nicolas Beaume, Isabela C. Fortunato, Stephane Dallongeville, Mikaël Boulle, et al. (2021). Interrogating RNA and protein spatial subcellular distribution in smFISH data with DypFISH . Cell Reports Methods.

Venice Juanillas, Alexis Dereeper, Nicolas Beaume, Gaetan Droc, Joshua Dizon, John Robert Mendoza, Jon Peter Perdon, Locedie Mansueto, Lindsay Triplett, Jillian Lang, et al. (2019). Rice Galaxy: an open resource for plant science . GigaScience.

OTHER

Venice Juanillas, Alexis Dereeper, Nicolas Beaume, Gaetan Droc, Joshua Dizon, John Robert Mendoza, Jon Peter Perdon, Locedie Mansueto, Lindsay Triplett, Jillian Lang, et al.(2018). Rice Galaxy: an open resource for plant science . Cold Spring Harbor Laboratory