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Profile Details

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USD 50 /hr

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Hire Dr. Macarena B.

Germany

USD 50 /hr

Freelancer Data Scientist & Biologist - Statistics, Python, Machine Learning, Deep Learning

Profile Summary

Biologist and Data Scientist in the Health and Biomedical sector. Very deep domain expertise in infectious diseases, diabetes, metabolism, nutrition and bioinformatics; coupled with a strong grounding in data analysis.

I co-authored 23 scientific papers and worked for TANDEM project funded by the European Commission (http://tandem-fp7.eu/consortium/mpiib/).

Health Domain Expertise:
- +10 years of experience working in the best healthcare research institutes managing international research projects and fostering international collaborations.
- Team leader of a work package of the TANDEM consortium, a European Union's Research and Innovation funding program, in an international and interdisciplinary team (http://tandem-fp7.eu/consortium/mpiib/). 
- Diabetes patients have a 3-fold increased risk of developing tuberculosis. By 2030 there will be 400 million diabetic patients so I researched the link between the two diseases.

Data Science Skills:
- Python, R, SQL
- Biostatistics, Bioinformatics, Biopython
- Machine learning; Scikit learn
- Neural Networks
- Portfolio Project: ‘Health patterns in 50 years of global data’, http://slides.com/mbeigier/deck

https://github.com/macabeigier/SharedPlots

Subject Matter Expertise

Services

Writing
Research
Data & AI

Writing Technical Writing

Research Fact Checking, Gray Literature Search, Systematic Literature Review, Secondary Data Collection

Data & AI Statistical Analysis, Algorithm Design-Non ML, Data Visualization

Work Experience

Data Science Consultant

modellagenten

March 2020 - Present

Data Science Consultant

Ancud IT

July 2018 - February 2020

Scientist in charge

TANDEM consortium (http://tandem-fp7.eu/consortium/mpiib)/

2013 - 2016

Researcher

MAX-PLANCK INSTITUTE FOR INFECTION BIOLOGY

2009 - 2016

Guest Researcher

HELMHOLZ ZENTRUM, INSTITUTE FOR DIABETES AND OBESITY

October 2015 - October 2015

Researcher

MAX-PLANCK INSTITUTE FOR INFECTION BIOLOGY

2007 - 2009

FELLOW FROM THE ALEXANDER VON HUMBOLDT FOUNDATION

Friedrich-Alexander-Universität Erlangen-Nürnberg

2005 - 2006

FELLOW OF THE NATIONAL RESEARCH COUNCIL FOR SCIENTIFIC AND TECHNOLOGICAL RESEARCH

Academia Nacional de Medicina

2003 - 2005

Teaching Asistant

Universidad de Buenos Aires Facultad de Medicina

2000 - 2005

Researcher

National Academy of Medicine - Argentina

January 2003 - April 2004

Invited Teaching Assistant

School of Law, Course Genetic Engineering and its Impact on Society at the Basic Course of Criminology, University of Buenos Aires

March 2000 - March 2002

PHD FELLOW OF THE NATIONAL RESEARCH COUNCIL FOR SCIENTIFIC AND TECHNOLOGICAL RESEARCH

Academia Nacional de Medicina

1998 - 2002

Education

Data Scientist

Data Science Retreat

January 2018 - April 2018

Advanced Training in Bioinformatics

CQ BERATUNG + BUILDUNG

March 2017 - September 2017

Biology

Universidad de Buenos Aires Facultad de Ciencias Exactas y Naturales

1993 - 1998

Certifications

Certification details not provided.

Publications

JOURNAL ARTICLE

(2017). Mycobacterium tuberculosis infection modulates adipose tissue biology . PLoS Pathogens.

(2016). Usage of Murine T-cell Hybridoma Cells as Responder Cells Reveals Interference of Helicobacter Pylori with Human Dendritic Cell-mediated Antigen Presentation . European journal of microbiology & immunology.

(2016). Rewiring cellular metabolism via the AKT/mTOR pathway contributes to host defence against Mycobacterium tuberculosis in human and murine cells . European journal of immunology.

(2014). TANDEM: understanding diabetes and tuberculosis . The lancet. Diabetes & endocrinology.

et al.(2014). Antigen export during liver infection of the malaria parasite augments protective immunity . mBio.

(2012). Comparative analysis of the interaction of Helicobacter pylori with human dendritic cells, macrophages, and monocytes . Infection and immunity.

(2011). Modulation of the CD4+ T-cell response by Helicobacter pylori depends on known virulence factors and bacterial cholesterol and cholesterol α-glucoside content . The Journal of infectious diseases.

(2010). Helicobacter pylori induces miR-155 in T cells in a cAMP-Foxp3-dependent manner . PloS one.

(2007). Immune complexes inhibit differentiation, maturation, and function of human monocyte-derived dendritic cells . Journal of immunology (Baltimore, Md. : 1950).

(2007). A novel function for galectin-1 at the crossroad of innate and adaptive immunity: galectin-1 regulates monocyte/macrophage physiology through a nonapoptotic ERK-dependent pathway . Journal of immunology (Baltimore, Md. : 1950).

(2005). Increased susceptibility to apoptosis of CD56dimCD16+ NK cells induces the enrichment of IFN-gamma-producing CD56bright cells in tuberculous pleurisy . Journal of immunology (Baltimore, Md. : 1950).

(2005). Galectin-3 and soluble fibrinogen act in concert to modulate neutrophil activation and survival: involvement of alternative MAPK pathways . Glycobiology.

(2004). Hypothesis: an alternative pathway for the regulation of inflammation . Medicina.

(2003). Monocytes and neutrophils from tuberculosis patients are insensitive to anti-inflammatory effects triggered by the prototypic formyl peptide N-formyl-methionyl-leucyl-phenylalanine (FMLP) . Clinical and experimental immunology.

(2003). Immune complex-FcgammaR interaction modulates monocyte/macrophage molecules involved in inflammation and immune response . Clinical and experimental immunology.

(2003). The formyl peptide N-formyl-methionyl-leucyl-phenylalanine downregulates the expression of FcgammaRs in interferon-gamma-activated monocytes/macrophages in vitro and in vivo . Scandinavian journal of immunology.

(2002). Interleukin-1beta induces in vivo tolerance to lipopolysaccharide in mice . Clinical and experimental immunology.

(2002). Soluble fibrinogen modulates neutrophil functionality through the activation of an extracellular signal-regulated kinase-dependent pathway . Journal of immunology (Baltimore, Md. : 1950).

(2001). Immune complexes (IC) down-regulate the basal and interferon-gamma-induced expression of MHC class II on human monocytes . Clinical and experimental immunology.

(2001). Activation of peripheral blood neutrophils from patients with active advanced tuberculosis . Clinical immunology (Orlando, Fla.).

(2001). N-formyl-methionyl-leucyl-phenylalanine inhibits both gamma interferon- and interleukin-10-induced expression of FcgammaRI on human monocytes . Clinical and diagnostic laboratory immunology.

(2001). Tolerance to lipopolysaccharide (LPS) regulates the endotoxin effects on Shiga toxin-2 lethality . Immunology letters.

(1999). The down-regulation of FcgammaRII and FcgammaRIIIB by N-formyl-methionyl-leucyl-phenylalanine (FMLP) depends on secretory events in human neutrophils . Immunology letters.