Profile Details

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Hire Muhammad A.

Pakistan

USD 20 /hr

Metabolic Modeling & Bioprocess Optimization Expert | Bioproduction | FBA | Fermentation Scale-Up

Profile Summary

I specialize in genome scale metabolic modeling, fermentation optimization and biopolymer production. I perform Flux Balance Analysis (FBA) using COBRA Toolbox and COBRApy to analyze metabolic flux distributions and improve product yields. I have experience in fermentation medium designing and optimization, shake flask fermentation, gene expression analysis and scale-up from lab to pilot scale. I also conduct techno-economic assessments to evaluate industrial feasibility. I help researchers and biotech teams optimize microbial production systems using both computational modeling and experimental insights.

Subject Matter Expertise

• ☆ Computational Biology
• ☆ Microbiology
• ☆ Industrial Microbiology
• ☆ Microbiological Assays
• ☆ Molecular Biology
• ☆ Molecular Evolution
• ☆ PCR
• ☆ Molecular Cloning
• ☆ DNA Sequencing
• ☆ Gene Expression Analysis
• ☆ Genome Sequencing
• ☆ Recombinant DNA
• ☆ Cell Biology
• ☆ Cell Signaling Pathways
• ☆ Membrane Biology
• ☆ Gene Regulation
• ☆ Biotechnology & Bioengineering
• ☆ Recombinant Protein Expression
• ☆ Microbial Biotechnology
• ☆ Biological Systems Engineering
• ☆ Biomass & Bioenergy
• ☆ Industrial Biotechnology
• ☆ Synthetic Biology
• ☆ Bioenergy & Biofuels
• ☆ Microbial Fermentation
• ☆ Chemical Biology

Services

• Writing
• Research
• Consulting
• Data & AI
• Product Development

Writing Technical Writing, Creative Writing, General Proofreading & Editing

Research Market Research, User Research, Feasibility Study, Scientific and Technical Research, Systematic Literature Review

Consulting Operations Consulting, Scientific and Technical Consulting, Financial Consulting, Regulatory Consulting, Manufacturing Consulting

Data & AI Statistical Analysis, Data Visualization, Data Processing

Product Development Formulation, Product Evaluation, Product Validation, Manufacturing, Quality Assurance & Control (QA/QC), Product Compliance , Concept Development, Product Launch Support, Prototyping, Reverse Engineering

Work Experience

Graduate Research Assistant / Research Assistant

National University of Science and Technology

December 2024 - Present

Education

Industrial Biotechnology

National University of Science and Technology

September 2023 - January 2026

BS Biotechnology

Government College University, Faisalabad

September 2019 - August 2023

Certifications

• Data Analysis with R Programming

  coursera

  https://www.coursera.org/account/accomplishments/certificate/6HCSLYA8YNBD

  August 2022 - Present

Publications

CONFERENCE PAPER

Muhammad Abdullah , Muhammad Abdullah , Muhammad Abdullah , Muhammad Abdullah , Muhammad Abdullah Environmental and metabolic stimulants enhance quorum sensing, virulence and xanthan gum production in Xanthomonas campestris. Implications for sustainable industrial fermentation . 5th International Conference on Water, Energy and Environment for Sustainability (ICWEES 2025).