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Hire Dr. Luigi C.
Italy
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Freelance Bioinformatician, Biostatician, Academic Scientific Writer
Profile Summary
Subject Matter Expertise
Services
Writing
Technical Writing,
Copywriting,
Newswriting
Research
Market Research,
User Research,
Meta-Research,
Fact Checking,
Gap Analysis,
Gray Literature Search,
Systematic Literature Review,
Secondary Data Collection
Consulting
Scientific and Technical Consulting
Data & AI
Predictive Modeling,
Statistical Analysis,
Data Visualization,
Big Data Analytics,
Data Processing,
Data Insights
Work Experience
Collaboration (Co.Co.Co.): Borsa di Studio n. 36/2019: Studio dei processi fisiologici di organismi planctonici esposti a variazioni ambientali attraverso analisi di metadati (Study of the physiological processes of planktonic organisms exposed to environmental variations through metadata analysis).
Stazione Zoologica Anton Dohrn
February 2020 - July 2021
Collaboration Segreteria scientifica nell’ambito del progetto School of Inquiry
Stazione Zoologica Anton Dohrn
June 2019 - September 2019
Post Doc Relazione per la presenza di organismi planctonici e quella di tratti funzionali ricavati da dati di metatrascrittomica e metagenomica nello spazio e nel tempo.
Stazione Zoologica Anton Dohrn
April 2018 - March 2019
Post-Doc Analisi di dati metagenomici per lo studio della diversità funzionale delle diatomee.
Stazione Zoologica Anton Dohrn
January 2016 - December 2017
Post-Doc Functional Diversity in marine organisms
Stazione Zoologica Anton Dohrn
January 2014 - December 2015
Post Doc Genetic variability in natural populations of Ciona intestinalis
Stazione Zoologica Anton Dohrn
February 2012 - December 2014
Post.Doc Adaptive potential in freshwater invertebrates'
Museo Tridentino di Scienze Naturali
February 2009 - February 2011
Education
PhD in Life Science
The Open University
November 2002 - November 2007
Degree in biological Science
Università degli Studi Di Napoli Federico
January 1997 - July 2001
Certifications
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Idoneità al ruolo di Ricercatore Terzo Livello
Consiglio Nazionale delle Richerche
January 2021 - Present
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idoneità al ruolo di Ricercatore a tempo determinato
Università della Tuscia
January 2021 - Present
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Tutor in the advanced course Advanced Statistics for biology and Ecology
Stazione Zoologica A. Dohrn
January 2017 - Present
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Course in Come scrivere una proposta di successo nel progamma ER
APRE
January 2017 - Present
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Tutor Studio dei macroinvertebrati d’acqua dolce
Museo Tridentino di Scienze Naturali
January 2010 - Present
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Idoneità al ruolo di Ricercatore Terzo Livello
Stazione Zoologica A. Dohrn
January 2009 - Present
Publications
JOURNAL ARTICLE
Luigi Caputi, David Osca, Marina Ceruso, Iolanda Venuti, Rosa Maria Sepe, Aniello Anastasio, Salvatore D’Aniello, Fabio Crocetta, Tiziana Pepe, Paolo Sordino (2021). The complete mitochondrial genome of the white seabream Diplodus sargus (Perciformes: Sparidae) from the Tyrrhenian sea . Mitochondrial DNA Part B.
Luigi Caputi, Anna Santin, Antonella Longo, Maurizio Chiurazzi, Maurizio Ribera d'Alcalà, Monia Teresa Russo, Maria Immacolata Ferrante, Alessandra Rogato (2021). Integrative omics identification, evolutionary and structural analysis of low affinity nitrate transporters in diatoms, diNPFs . Open Biology.
Santin, A., Caputi, L., Longo, A., Chiurazzi, M., Ribera d'Alcalà, M., Russo, M.T., Ferrante, M.I., Rogato, A.(2021). Integrative omics identification, evolutionary and structural analysis of low affinity nitrate transporters in diatoms, diNPFs . Open biology. 11. (4). p. 200395.
Luigi Caputi, Greta Busseni, Roberta Piredda, Paul Fremont, Bruno Hay Mele, Lucia Campese, Eleonora Scalco, Colomban Vargas, Chris Bowler, Francesco d'Ovidio, et al.(2020). Large scale patterns of marine diatom richness: Drivers and trends in a changing ocean . Global Ecology and Biogeography. Wiley
Luigi Caputi, Marina Ceruso, Iolanda Venuti, David Osca, Aniello Anastasio, Fabio Crocetta, Paolo Sordino, Tiziana Pepe(2020). The complete mitochondrial genome of the sharpsnout seabream Diplodus puntazzo (Perciformes: Sparidae) . Mitochondrial DNA Part B. 5. (3). p. 2379--2381. Informa {UK} Limited
(2020). High genetic connectivity in a gastropod with long-lived planktonic larvae . Journal of Molluscan Studies.
Luigi Caputi, Paolo Sordino, Salvatore D'Aniello, Eric Pelletier, Patrick Wincker, Valeria Nittoli, Lars Stemmann, Maria Grazia Mazzocchi, Fabien Lombard, Daniele Iudicone(2020). Into the bloom: Molecular response of pelagic tunicates to fluctuating food availability . Molecular Ecology. Wiley
Ceruso, M., Venuti, I., Osca, D., Caputi, L., Anastasio, A., Crocetta, F., Sordino, P., Pepe, T.(2020). The complete mitochondrial genome of the sharpsnout seabream Diplodus puntazzo (Perciformes: Sparidae) . Mitochondrial DNA Part B: Resources. 5. (3). p. 2379-2381.
Crocetta, F., Caputi, L., Paz-Sedano, S., Tanduo, V., Vazzana, A., Oliverio, M.(2020). High genetic connectivity in a gastropod with long-lived planktonic larvae . Journal of Molluscan Studies. 86. (1). p. 42-55.
Sordino, P., D'Aniello, S., Pelletier, E., Wincker, P., Nittoli, V., Stemmann, L., Mazzocchi, M.G., Lombard, F., Iudicone, D., Caputi, L.(2020). Into the bloom: Molecular response of pelagic tunicates to fluctuating food availability . Molecular Ecology. 29. (2). p. 292-307.
Sepe, R.M., Ghiron, J.H.L., Zucchetti, I., Caputi, L., Tarallo, R., Crocetta, F., De Santis, R., D’Aniello, S., Sordino, P.(2020). The EJC component Magoh in non-vertebrate chordates . Development Genes and Evolution. 230. (4). p. 295-304.
Busseni, G., Caputi, L., Piredda, R., Fremont, P., Hay Mele, B., Campese, L., Scalco, E., de Vargas, C., Bowler, C., d'Ovidio, F., et al.(2020). Large scale patterns of marine diatom richness: Drivers and trends in a changing ocean . Global Ecology and Biogeography. 29. (11). p. 1915-1928.
(2019). Meta-Omics Reveals Genetic Flexibility of Diatom Nitrogen Transporters in Response to Environmental Changes . Molecular Biology and Evolution.
Luigi Caputi, Francesco Toscano, Michele Arienzo, Luciano Ferrara, Gabriele Procaccini, Paolo Sordino(2019). Temporal correlation of population composition and environmental variables in the marine invader Ciona robusta . Marine Ecology. 40. (2). p. e12543. Wiley
Luigi Caputi, Quentin Carradec, Damien Eveillard, Amos Kirilovsky, Eric Pelletier, Juan J. Pierella Karlusich, Fabio Rocha Jimenez Vieira, Emilie Villar, Samuel Chaffron, Shruti Malviya, et al.(2019). Community‐Level Responses to Iron Availability in Open Ocean Plankton Ecosystems . Global Biogeochemical Cycles. American Geophysical Union ({AGU})
Ambrosino, L., Vassalli, Q.A., D'Agostino, Y., Esposito, R., Cetrangolo, V., Caputi, L., Amoroso, A., Aniello, F., D'Aniello, S., Chatzigeorgiou, M., et al.(2019). Functional conserved non-coding elements among tunicates and chordates . Developmental Biology. 448. (2). p. 101-110.
D'Alelio, D., Eveillard, D., Coles, V.J., Caputi, L., Ribera d'Alcalà, M., Iudicone, D.(2019). Modelling the complexity of plankton communities exploiting omics potential: From present challenges to an integrative pipeline . Current Opinion in Systems Biology. 13. p. 68-74.
Caputi, L., Carradec, Q., Eveillard, D., Kirilovsky, A., Pelletier, E., Pierella Karlusich, J.J., Rocha Jimenez Vieira, F., Villar, E., Chaffron, S., Malviya, S., et al.(2019). Community-Level Responses to Iron Availability in Open Ocean Plankton Ecosystems . Global Biogeochemical Cycles. 33. (3). p. 391-419.
Caputi, L., Toscano, F., Arienzo, M., Ferrara, L., Procaccini, G., Sordino, P.(2019). Temporal correlation of population composition and environmental variables in the marine invader Ciona robusta . Marine Ecology. 40. (2).
Busseni, G., Rocha Jimenez Vieira, F., Amato, A., Pelletier, E., Pierella Karlusich, J.J., Ferrante, M.I., Wincker, P., Rogato, A., Bowler, C., Sanges, R., et al.(2019). Meta-Omics Reveals Genetic Flexibility of Diatom Nitrogen Transporters in Response to Environmental Changes . Molecular Biology and Evolution. 36. (11). p. 2522-2535.
Langellotto, Fernanda and Fiorentino, Maria and Felice, Elena De and Caputi, Luigi and Nittoli, Valeria and Joss, Jean M P and Sordino, Paolo(2018). Expression of meis and hoxa11 in dipnoan and teleost fins provides new insights into the evolution of vertebrate appendages . EvoDevo. p. 1--11. BioMed Central
Langellotto, F., Fiorentino, M., Felice, E., Caputi, L., Nittoli, V., Joss, J.M.P., Sordino, P.(2018). Expression of meis and hoxa11 in dipnoan and teleost fins provides new insights into the evolution of vertebrate appendages . EvoDevo. 9. (1).
Stec, Krzysztof Franciszek and Caputi, Luigi and Buttigieg, Pier Luigi and D'Alelio, Domenico and Ibarbalz, Federico Matias and Sullivan, Matthew B. and Chaffron, Samuel and Bowler, Chris and Ribera d'Alcal{\`{a}}, Maurizio and Iudicone, Daniele(2017). Modelling plankton ecosystems in the meta-omics era. Are we ready? . Marine Genomics. 32. p. 1--17. Elsevier B.V.
Stec, K.F., Caputi, L., Buttigieg, P.L., D'Alelio, D., Ibarbalz, F.M., Sullivan, M.B., Chaffron, S., Bowler, C., Ribera d'Alcalà, M., Iudicone, D.(2017). Modelling plankton ecosystems in the meta-omics era. Are we ready? . Marine Genomics. 32. p. 1-17.
Luigi Caputi, Andrea Pappalardo, Immacolata Porreca, Elena De Felice, Stephan Schulte-Merker, Mariastella Zannini, Paolo Sordino(2015). Thyroid development in zebrafish lacking Taz . Mechanisms of Development. 138. p. 268--278. Elsevier {BV}
Pappalardo, A., Porreca, I., Caputi, L., De Felice, E., Schulte-Merker, S., Zannini, M., Sordino, P.(2015). Thyroid development in zebrafish lacking Taz . Mechanisms of Development. 138. p. 268-278.
Affinito, Ornella and Andreakis, Nikos and Caputi, Luigi and Marino, Rita and Pannone, Raimondo and Sordino, Paolo and Procaccini, Gabriele(2015). High connectivity and directional gene flow in European Atlantic and Mediterranean populations of Ciona intestinalis sp. A . Marine Ecology. 36. (4). p. 1230--1243.
Affinito, O., Andreakis, N., Caputi, L., Marino, R., Pannone, R., Sordino, P., Procaccini, G.(2015). High connectivity and directional gene flow in European Atlantic and Mediterranean populations of Ciona intestinalis sp. A . Marine Ecology. 36. (4). p. 1230-1243.
Caputi, L., Crocetta, F., Toscano, F., Sordino, P., Cirino, P.(2015). Long-term demographic and reproductive trends in Ciona intestinalis sp. A . Marine Ecology. 36. (1). p. 118-128.
Vassalli, Quirino Attilio and Anishchenko, Evgeniya and Caputi, Luigi and Sordino, Paolo and D'Aniello, Salvatore and Locascio, Annamaria(2015). Regulatory elements retained during chordate evolution: Coming across tunicates . Genesis. 53. (1). p. 66--81.
Vassalli, Q.A., Anishchenko, E., Caputi, L., Sordino, P., D'Aniello, S., Locascio, A.(2015). Regulatory elements retained during chordate evolution: Coming across tunicates . Genesis. 53. (1). p. 66-81.
Pappalardo, Andrea and Porreca, Immacolata and Caputi, Luigi and {De Felice}, Elena and Schulte-Merker, Stephan and Zannini, Mariastella and Sordino, Paolo(2015). Thyroid development in zebrafish lacking Taz . Mechanisms of Development. 138. p. 268--278.
Arienzo, M., Toscano, F., Di Fraia, M., Caputi, L., Sordino, P., Guida, M., Aliberti, F., Ferrara, L.(2014). An assessment of contamination of the Fusaro Lagoon (Campania Province, southern Italy) by trace metals . Environmental Monitoring and Assessment. 186. (9). p. 5731-5747.
Arienzo, M. and Toscano, F. and {Di Fraia}, M. and Caputi, L. and Sordino, P. and Guida, M. and Aliberti, F. and Ferrara, L.(2014). An assessment of contamination of the Fusaro Lagoon (Campania Province, southern Italy) by trace metals . Environmental Monitoring and Assessment. 186. (9). p. 5731--5747.
Dassi, E. and Malossini, A. and Re, A. and Mazza, T. and Tebaldi, T. and Caputi, L. and Quattrone, A.(2012). AURA: Atlas of UTR regulatory activity . Bioinformatics. 28. (1). p. 142--144.
Sordino, Paolo and Andreakis, Nikos and Brown, Euan R. and Leccia, Nicola I. and Squarzoni, Paola and Tarallo, Raffaella and Alfano, Christian and Caputi, Luigi and D'Ambrosio, Palmira and Daniele, Paola and D'Aniello, Enrico and D'Aniello, Salvatore and Maiella, Sylvie and Miraglia, Valentina and Russo, Monia Teresa and Sorrenti, Gerarda and Branno, Margherita and Cariello, Lucio and Cirino, Paola and Locascio, Annamaria and Spagnuolo, Antonietta and Zanetti, Laura and Ristoratore, Filomena(2008). Natural variation of model mutant phenotypes in Ciona intestinalis . PLoS ONE. 3. (6).
Sordino, P., Andreakis, N., Brown, E.R., Leccia, N.I., Squarzoni, P., Tarallo, R., Alfano, C., Caputi, L., D'Ambrosio, P., Daniele, P., et al.(2008). Natural variation of model mutant phenotypes in Ciona intestinalis . PLoS ONE. 3. (6).
Caputi, L., Borra, M., Andreakis, N., Biffali, E., Sordino, P.(2008). SNPs and Hox gene mapping in Ciona intestinalis . BMC Genomics. 9.
Andreakis, N., Caputi, L., Sordino, P.(2007). Characterization of highly polymorphic nuclear microsatellite loci from the ascidian Ciona intestinalis . Molecular Ecology Notes. 7. (4). p. 610-612.
Caputi, L., Andreakis, N., Mastrototaro, F., Cirino, P., Vassillo, M., Sordino, P.(2007). Cryptic speciation in a model invertebrate chordate . Proceedings of the National Academy of Sciences of the United States of America. 104. (22). p. 9364-9369.
Andreakis, N. and Caputi, L. and Sordino, P.(2007). Characterization of highly polymorphic nuclear microsatellite loci from the ascidian Ciona intestinalis . Molecular Ecology Notes. 7. (4). p. 610--612.
Piscopo, S., Moccia, F., Di Cristo, C., Caputi, L., Di Cosmo, A., Brown, E.R.(2007). Pre- and postsynaptic excitation and inhibition at octopus optic lobe photoreceptor terminals; implications for the function of the 'presynaptic bags' . European Journal of Neuroscience. 26. (8). p. 2196-2203.
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