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Hire Dr. Krishanu M.

United States

USD 125 /hr

AI & Bioinformatics Consultant | Expert in Genomics, Machine Learning & Drug Discovery

Profile Summary

I am an AI & Bioinformatics Consultant with over 10 years of experience in computational biology, machine learning, and large-scale genomic data analysis. My expertise lies in applying AI, deep learning, and statistical modeling to extract insights from genomics, biomarker discovery, and drug development. I have worked with leading institutions such as the University of Florida, Icahn School of Medicine at Mount Sinai, and Karolinska Institute, as well as major biotech & pharma companies including Amgen and Boehringer Ingelheim. My research spans single-cell transcriptomics, NGS analysis, and computational drug discovery, with publications in Nature, Molecular Biology and Evolution, and Frontiers in Neuroscience.

Subject Matter Expertise

• ☆ Chemoinformatics
• ☆ Computational Biology
• ☆ Biochemistry
• ☆ Molecular Biology
• ☆ Omics
• ☆ Transcriptomics
• ☆ Genomics
• ☆ Cell Biology
• ☆ Neuroscience
• ☆ Data Analysis
• ☆ Machine Learning
• ☆ Deep Learning
• ☆ Statistics
• ☆ Health Data Analysis
• ☆ Bioinformatics
• ☆ Biomarker Discovery
• ☆ R
• ☆ Drug Discovery
• ☆ Drug Development

Services

• Writing
• Research
• Consulting
• Data & AI
• Product Development

Writing Clinical Trial Documentation, Medical Writing, Technical Writing

Research Meta-Research, Feasibility Study, Technology Scouting, Scientific and Technical Research, Systematic Literature Review

Consulting Healthcare Consulting, Scientific and Technical Consulting, Regulatory Consulting

Data & AI Predictive Modeling, Statistical Analysis, Image Processing, Algorithm Design-ML, Data Visualization, Big Data Analytics, Text Mining & Analytics, Data Mining, Data Cleaning, Data Processing, Data Insights

Product Development Formulation, Product Evaluation, Product Validation, Quality Assurance & Control (QA/QC)

Work Experience

Biological Scientist

University of Florida

- Present

Biological Scientist

University of Florida

February 2024 - Present

Assistant Professor (Contractual)

Icahn School of Medicine at Mount Sinai

February 2023 - February 2024

Education

Postdoc

University of Florida

July 2014 - January 2023

Certifications

• Certification details not provided.

Publications

JOURNAL ARTICLE

Krishanu Mukherjee, Rushikesh D. Bharsakale, Mrugendra G. Gubyad, Amol D. Kokane, Sunil B. Kokane, Pragati Misra, Dilip Kumar Ghosh (2025). Development of diagnostic tools and discovery of two novel Indian citrus ringspot virus species: insights into global mandarivirus phylogeography . Frontiers in Microbiology.

Mukherjee K, Moroz LL(2024). Parallel Evolution of Transcription Factors in Basal Metazoans . Methods in molecular biology (Clifton, N.J.).

Moroz LL, Mukherjee K, Romanova DY(2023). Nitric oxide signaling in ctenophores . Frontiers in neuroscience.

Ghosh DK, Kokane A, Kokane S, Mukherjee K, Tenzin J, Surwase D, Deshmukh D, Gubyad M, Biswas KK(2022). A Comprehensive Analysis of Citrus Tristeza Variants of Bhutan and Across the World . Frontiers in microbiology.

Katayama S, Ranga V, Jouhilahti EM, Airenne TT, Johnson MS, Mukherjee K, Bürglin TR, Kere J(2018). Phylogenetic and mutational analyses of human LEUTX, a homeobox gene implicated in embryogenesis . Scientific reports.

Whelan NV, Kocot KM, Moroz TP, Mukherjee K, Williams P, Paulay G, Moroz LL, Halanych KM(2017). Author Correction: Ctenophore relationships and their placement as the sister group to all other animals . Nature ecology & evolution.

Whelan NV, Kocot KM, Moroz TP, Mukherjee K, Williams P, Paulay G, Moroz LL, Halanych KM(2017). Ctenophore relationships and their placement as the sister group to all other animals . Nature ecology & evolution.

Korithoski B, Kolaczkowski O, Mukherjee K, Kola R, Earl C, Kolaczkowski B(2015). Evolution of a Novel Antiviral Immune-Signaling Interaction by Partial-Gene Duplication . PloS one.

Ghosh DK, Bhose S, Motghare M, Warghane A, Mukherjee K, Sharma AK, Ladaniya MS, Gowda S(2015). Genetic Diversity of the Indian Populations of 'Candidatus Liberibacter asiaticus' Based on the Tandem Repeat Variability in a Genomic Locus . Phytopathology.

Hench J, Henriksson J, Abou-Zied AM, Lüppert M, Dethlefsen J, Mukherjee K, Tong YG, Tang L, Gangishetti U, Baillie DL, et al.(2015). The Homeobox Genes of Caenorhabditis elegans and Insights into Their Spatio-Temporal Expression Dynamics during Embryogenesis . PloS one.

Xiong Y, Mei W, Kim ED, Mukherjee K, Hassanein H, Barbazuk WB, Sung S, Kolaczkowski B, Kang BH(2014). Adaptive expansion of the maize maternally expressed gene (Meg) family involves changes in expression patterns and protein secondary structures of its members . BMC plant biology.

Moroz LL, Kocot KM, Citarella MR, Dosung S, Norekian TP, Povolotskaya IS, Grigorenko AP, Dailey C, Berezikov E, Buckley KM, et al.(2014). The ctenophore genome and the evolutionary origins of neural systems . Nature.

Mukherjee K, Korithoski B, Kolaczkowski B(2013). Ancient origins of vertebrate-specific innate antiviral immunity . Molecular biology and evolution.

Mukherjee K, Brocchieri L(2013). Ancient Origin of Chaperonin Gene Paralogs Involved in Ciliopathies . Journal of phylogenetics & evolutionary biology.

Mukherjee K, Campos H, Kolaczkowski B(2012). Evolution of animal and plant dicers: early parallel duplications and recurrent adaptation of antiviral RNA binding in plants . Molecular biology and evolution.

Mukherjee K, Conway de Macario E, Macario AJ, Brocchieri L(2010). Chaperonin genes on the rise: new divergent classes and intense duplication in human and other vertebrate genomes . BMC evolutionary biology.

Mukherjee K, Brocchieri L, Bürglin TR(2009). A comprehensive classification and evolutionary analysis of plant homeobox genes . Molecular biology and evolution.

Mukherjee K, Bürglin TR(2007). Comprehensive analysis of animal TALE homeobox genes: new conserved motifs and cases of accelerated evolution . Journal of molecular evolution.

Hao L, Mukherjee K, Liegeois S, Baillie D, Labouesse M, Bürglin TR(2006). The hedgehog-related gene qua-1 is required for molting in Caenorhabditis elegans . Developmental dynamics : an official publication of the American Association of Anatomists.

Mukherjee K, Bürglin TR(2006). MEKHLA, a novel domain with similarity to PAS domains, is fused to plant homeodomain-leucine zipper III proteins . Plant physiology.

Mukherjee K, Verma Y, Chakrabarti SK, Khurana SM(2004). Phylogenetic analysis of 5'-UTR and P1 protein of Indian common strain of potato virus Y reveals its possible introduction in India . Virus genes.

Mukherjee K, Verma Y, Chakrabarti SK, Singh MN, Khurana SM(2003). Cloning and sequencing of coat protein gene of an Indian potato leaf roll virus (PLRV) isolate and its similarity with other members of Luteoviridae . Virus genes.

Mukherjee, K., Sen, B.(1998). Biological control of fusarium wilt of muskmelon by formulations of aspergillus niger . Israel Journal of Plant Sciences. 46. (1). p. 67-72.

PREPRINT

Krishanu Mukherjee, Leonid L. Moroz (2024). Evolution of g-Type Lysozymes in Metazoa: Insights into Immunity and Digestive Adaptations .

Mukherjee K, Moroz LL(2022). Transposon-derived transcription factors across metazoans .