Profile Details

Create Project

★★★★★

☆☆☆☆☆

USD 30 /hr

★★★★★

☆☆☆☆☆

Hire Dr. Karthikeyan M.

India

USD 30 /hr

Computational Biologist | Expertise in Experimental and Computational Biology | Experienced in Python Programming

Profile Summary

Computational biologist with a PhD from the Faculty of Medicine, TU Dresden, Germany, specializing in data-driven research, descriptive statistical analysis and network analysis. Skilled in developing computational tools and databases for biological research, and proficient in interdisciplinary collaboration to solve complex biological problems. Proven track record in delivering impactful solutions to complex biological challenges.

Subject Matter Expertise

• ☆ Computational Biology
• ☆ Biostatistics
• ☆ Biochemistry
• ☆ Biochemical Assays
• ☆ Enzyme Activity Assays
• ☆ Molecular Biology
• ☆ Omics
• ☆ Metabolomics
• ☆ PCR
• ☆ Cell Biology
• ☆ Cell-Based Assays
• ☆ Data Collection
• ☆ Statistics
• ☆ Applied Statistics
• ☆ Comparative Analysis
• ☆ Regression Analysis
• ☆ Multivariate Analysis
• ☆ Nonlinear Regression
• ☆ Correlation Analysis
• ☆ Bioinformatics
• ☆ Gene & Protein Expression Analysis
• ☆ Systems Biology
• ☆ Cell Culture
• ☆ Primary Cells
• ☆ 3D Cell Culture
• ☆ Python
• ☆ SQL
• ☆ Excel
• ☆ R
• ☆ Markup Languages
• ☆ Endocrinology
• ☆ Diabetes
• ☆ Metabolism & Metabolic Disease

Services

• Writing
• Research
• Consulting
• Data & AI
• Product Development

Writing Technical Writing, General Proofreading & Editing

Research Fact Checking, Scientific and Technical Research, Secondary Data Collection

Consulting Scientific and Technical Consulting

Data & AI Statistical Analysis, Data Visualization, Data Cleaning, Data Processing, Data Insights

Product Development Manufacturing, Concept Development

Work Experience

Doktorand

TU Dresden

April 2020 - March 2024

Graduate Research Assistant / Research Assistant

The Institute of Mathematical Sciences (IMSc)

May 2016 - February 2020

Education

PhD (Faculty of Medicine)

Technische Universität Dresden - Germany

February 2020 - November 2024

Bachelors of Technology (Bioinformatics)

Bharathidasan University

July 2012 - May 2016

Certifications

• Certification details not provided.

Publications

JOURNAL ARTICLE

Ajaya Kumar Sahoo, R. P. Vivek-Ananth, Nikhil Chivukula, Shri Vishalini Rajaram, Karthikeyan Mohanraj, Devanshi Khare, Celin Acharya, Areejit Samal (2023). T9GPred: A Comprehensive Computational Tool for the Prediction of Type 9 Secretion System, Gliding Motility, and the Associated Secreted Proteins . ACS Omega.

R.P. Vivek-Ananth, Karthikeyan Mohanraj, Ajaya Kumar Sahoo, Areejit Samal (2023). IMPPAT 2.0: An Enhanced and Expanded Phytochemical Atlas of Indian Medicinal Plants . ACS Omega.

Vivek-Ananth, R.P., Mohanraj, K., Sahoo, A.K., Samal, A.(2023). IMPPAT 2.0: An Enhanced and Expanded Phytochemical Atlas of Indian Medicinal Plants . ACS Omega. 8. (9). p. 8827-8845.

Shee, S., Veetil, R.T., Mohanraj, K., Das, M., Malhotra, N., Bandopadhyay, D., Beig, H., Birua, S., Niphadkar, S., Nagarajan, S.N., et al.(2023). Biosensor-integrated transposon mutagenesis reveals rv0158 as a coordinator of redox homeostasis in Mycobacterium tuberculosis . eLife. 12.

Sahoo, A.K., Vivek-Ananth, R.P., Chivukula, N., Rajaram, S.V., Mohanraj, K., Khare, D., Acharya, C., Samal, A.(2023). T9GPred: A Comprehensive Computational Tool for the Prediction of Type 9 Secretion System, Gliding Motility, and the Associated Secreted Proteins . ACS Omega. 8. (37). p. 34091-34102.

Vivek-Ananth, R.P., Sahoo, A.K., Kumaravel, K., Mohanraj, K., Samal, A.(2021). MeFSAT: a curated natural product database specific to secondary metabolites of medicinal fungi . RSC Advances. 11. (5). p. 2596-2607.

Bornstein, S.R., Guan, K., Brunβen, C., Mueller, G., Kamvissi-Lorenz, V., Lechler, R., Trembath, R., Mayr, M., Poston, L., Sancho, R., et al.(2021). The transCampus Metabolic Training Programme Explores the Link of SARS-CoV-2 Virus to Metabolic Disease . Hormone and Metabolic Research. 53. (3). p. 204-206.

Barthel, A., Mohanraj, K., Biener, A.M., Bornstein, S.R.(2020). Metabolic Syndrome and COVID-19: Endocrine-Immune Vascular Interactions Shape the Clinical Course . Endocrinology (United States). 161. (12).

Horta, M.A.C., Thieme, N., Gao, Y., Burnum-Johnson, K.E., Nicora, C.D., Gritsenko, M.A., Lipton, M.S., Mohanraj, K., de Assis, L.J., Lin, L., et al.(2019). Broad Substrate-Specific Phosphorylation Events Are Associated With the Initial Stage of Plant Cell Wall Recognition in Neurospora crassa . Frontiers in Microbiology. 10.

Karthikeyan, B.S., Ravichandran, J., Mohanraj, K., Vivek-Ananth, R.P., Samal, A.(2019). A curated knowledgebase on endocrine disrupting chemicals and their biological systems-level perturbations . Science of the Total Environment. 692. p. 281-296.

Vivek-Ananth, R.P., Mohanraj, K., Vandanashree, M., Jhingran, A., Craig, J.P., Samal, A.(2018). Comparative systems analysis of the secretome of the opportunistic pathogen Aspergillus fumigatus and other Aspergillus species . Scientific Reports. 8. (1).

Mohanraj, K., Karthikeyan, B.S., Vivek-Ananth, R.P., Chand, R.P.B., Aparna, S.R., Mangalapandi, P., Samal, A.(2018). IMPPAT: A curated database of Indian Medicinal Plants, Phytochemistry and Therapeutics . Scientific Reports. 8. (1).

Sreejith, R.P., Mohanraj, K., Jost, J., Saucan, E., Samal, A.(2016). Forman curvature for complex networks . Journal of Statistical Mechanics: Theory and Experiment. 2016. (6).

PREPRINT

Ajaya Kumar Sahoo, R. P. Vivek-Ananth, Nikhil Chivukula, Shri Vishalini Rajaram, Karthikeyan Mohanraj, Devanshi Khare, Celin Acharya, Areejit Samal (2023). T9GPred: A Comprehensive Computational Tool for the Prediction of Type 9 Secretion System, Gliding Motility and the Associated Secreted Proteins .

OTHER

Sahoo, A.K., Vivek-Ananth, R.P., Chivukula, N., Rajaram, S.V., Mohanraj, K., Khare, D., Acharya, C., Samal, A.(2023). T9GPred: A Comprehensive Computational Tool for the Prediction of Type 9 Secretion System, Gliding Motility and the Associated Secreted Proteins . bioRxiv.

Singh, A., Shee, S., Veetil, R.T., Mohanraj, K., Das, M., Malhotra, N., Bandopadhyay, D., Beig, H., Birua, S., Niphadkar, S., et al.(2022). Biosensor-integrated transposon mutagenesis reveals rv0158 as a coordinator of redox homeostasis in Mycobacterium tuberculosis . Research Square.

Vivek-Ananth, R.P., Mohanraj, K., Sahoo, A.K., Samal, A.(2022). IMPPAT 2.0: an enhanced and expanded phytochemical atlas of Indian medicinal plants . bioRxiv.

Vivek-Ananth, R.P., Sahoo, A.K., Kumaravel, K., Mohanraj, K., Samal, A.(2020). MeFSAT: A curated natural product database specific to secondary metabolites of medicinal fungi . bioRxiv.

Karthikeyan, B.S., Ravichandran, J., Mohanraj, K., Vivek-Ananth, R.P., Samal, A.(2019). A curated knowledgebase enabling a network perspective on endocrine disrupting chemicals and their biological systems-level perturbations . bioRxiv.

Horta, M.A.C., Thieme, N., Gao, Y., Burnum-Johnson, K.E., Nicora, C.D., Gritsenko, M.A., Lipton, M.S., Mohanraj, K., de Assis, L.J., Lin, L., et al.(2019). Broad substrate-specific phosphorylation events are associated with the initial stage of plant cell wall recognition in Neurospora crassa . bioRxiv.

Vivek-Ananth, R.P., Mohanraj, K., Vandanashree, M., Jhingran, A., Craig, J.P., Samal, A.(2017). Comparative systems analysis of the secretome of the opportunistic pathogen Aspergillus fumigatus and other Aspergillus species . bioRxiv.

Mohanraj, K., Karthikeyan, B.S., Vivek-Ananth, R.P., Bharath Chand, R.P., Aparna, S.R., Mangalapandi, P., Samal, A.(2017). IMPPAT: A curated database of Indian Medicinal Plants, Phytochemistry And Therapeutics . bioRxiv.