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Profile Details
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USD 60 /hr
Hire Gungor B.
Turkey
USD 60 /hr

Senior Software Engineer | Expert in Python & R

Profile Summary
Subject Matter Expertise
Services
Data & AI Statistical Analysis, Algorithm Design-Non ML, Data Visualization
Work Experience

Senior Software Engineer

EPAM Systems

November 2024 - Present

Senior Software Engineer

EPAM Systems

November 2024 - Present

Bioinformatics Engineer

Velsera

April 2023 - October 2024

Bioinformatics Analyst

Seven Bridges

December 2016 - April 2023

Research Scholar

Indiana University Purdue University at Indianapolis

October 2015 - June 2016

Software Specialist

Evias Pharmaceutical R&D

February 2015 - September 2015

Intern

Maastricht University

June 2013 - September 2013

Intern

Deutsches Krebsforschungszentrum

June 2012 - October 2012

Education

PhD (Computer Engineering)

Middle East Technical University

October 2016 - 2024

MSc (Bioinformatics)

Middle East Technical University

September 2014 - September 2016

BSc (Biology)

Middle East Technical University

September 2010 - February 2014

Certifications
  • Certification details not provided.
Publications
JOURNAL ARTICLE
Pan-African genome demonstrates how population-specific genome graphs improve high-throughput sequencing data analysis <head> <META HTTP-EQUIV="Refresh" CONTENT="0;URL=/servlet/useragent"> </head> . Nature Communications.
Budak G, Dash S, Srivastava R, Lachke SA, Janga SC(2018). Express: A database of transcriptome profiles encompassing known and novel transcripts across multiple development stages in eye tissues . Experimental eye research.
Gungor Budak, Rajneesh Srivastava, Soma Dash, Salil A. Lachke, Sarath Chandra Janga(2017). Transcriptome analysis of developing lens reveals abundance of novel transcripts and extensive splicing alterations . Scientific Reports. 7. (1). Springer Nature
Gungor Budak, Rajneesh Srivastava, Sarath Chandra Janga(2017). Seten: a tool for systematic identification and comparison of processes, phenotypes, and diseases associated with RNA-binding proteins from condition-specific CLIP-seq profiles . RNA. 23. (6). p. 836--846. Cold Spring Harbor Laboratory
Hill SM, Heiser LM, Cokelaer T, Unger M, Nesser NK, Carlin DE, Zhang Y, Sokolov A, Paull EO, Wong CK, Graim K, Bivol A, Wang H, Zhu F, Afsari B, Danilova LV, Favorov AV, Lee WS, Taylor D, Hu CW, Nature methods, 2016 .
Hashemikhabir S, Budak G, Janga SC, Cancer informatics, 2016, vol. 15, no. Suppl 2, pp. 17-24, 2016 .
Gungor Budak, Oyku Eren Ozsoy, Yesim Aydin Son, Tolga Can, Nurcan Tuncbag(2015). Reconstruction of the temporal signaling network in Salmonella-infected human cells . Front. Microbiol. 6. Frontiers Media {SA}
CONFERENCE PAPER
Gungor Budak, Seyedsasan Hashemikhabir, Gokhan Ersoy, Gokce Oguz, Burcu Yaldiz, Yener Tuncel, Saygin Karaaslan, Yesim Aydin Son, Tolga Can(2012). M4B: A novel method for designing and ordering of the genetic devices . 2012 7th International Symposium on Health Informatics and Bioinformatics. {IEEE}