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Hire Dr. Federico G.

Italy

NGS Pipeline Developer & Bioinformatics Consultant | Microbiome, NIPT, Oncology Panels | 15+ Years Experience

Profile Summary

I am a molecular biologist and bioinformatician with a PhD in Biology (Oncology) and over 15 years of experience bridging wet lab research and computational analysis. As co-founder and Scientific Director of two diagnostics companies in Italy (Biolab S.r.l. and Dianext S.r.l.), I have hands-on expertise in developing and deploying NGS-based diagnostic services. Core expertise: NGS pipeline development (IonTorrent, Illumina) Microbiome analysis (16S/shotgun) Prenatal diagnostics (cfDNA, NIPT) Oncology panels and variant calling Pharmacogenomics Key achievements: Developed MaterniCode, a proprietary NIPT bioinformatics pipeline for fetal aneuploidy detection (patent pending, published in Int J Genomics 2024) Built MioBioma, a complete microbiome analysis service with custom reporting Co-authored publications on ocular microbiome and HER2 cancer research Technical stack: Python, R, Bash, Linux server administration, BWA, GATK, VarScan, Annovar, VEP, Galaxy Education: PhD in Biology (University of Camerino), Master's in Genomic Data Science (University of Pavia), Master's in Applied Bioinformatics (University of San Diego) I am available for consulting, pipeline development, data analysis, and scientific writing in the fields of genomics, metagenomics, and molecular diagnostics.

Subject Matter Expertise

• ☆ Molecular Biology
• ☆ Omics
• ☆ Genomics
• ☆ Data Analysis
• ☆ Machine Learning
• ☆ Bioinformatics
• ☆ Python
• ☆ R

Services

• Writing
• Research
• Consulting
• Data & AI

Writing Medical Writing, Technical Writing

Research Scientific and Technical Research

Consulting Healthcare Consulting, Scientific and Technical Consulting

Data & AI Algorithm Design-Non ML, Algorithm Design-ML, Data Visualization, Big Data Analytics, Data Processing

Work Experience

Scientific Director

Biolab srl

March 2011 - Present

Scientific Director

Biolab srl

March 2011 - Present

Education

M.A. Genomic Data Science

University of Pavia

2022 - Present

M.A. Applied Bioinformatics

University of San Diego

2021 - Present

Ph.D. Biology

Università di Camerino

2010 - Present

MSc Molecular Biology

Università di Camerino

2008 - Present

BSc Biotechnology

Università di Camerino

2006 - Present

Masters (Science)

University of Pavia

January 2020 - July 2022

Masters (Science)

University of San Diego

January 2021 - December 2021

PhD

University of Camerino

January 2009 - July 2011

MSc

University of Camerino

January 2006 - July 2008

BSc

University of Camerino

January 2003 - January 2006

Certifications

• Certification details not provided.

Publications

JOURNAL ARTICLE

Federico Gabrielli, Vito Romano, Mariantonia Ferrara, Francesca Gatti, Matteo Airaldi, Davide Borroni, Emanuela Aragona, Carlos Rocha-de-Lossada, Filomena Tiziana Papa, Mario R. Romano, et al. (2024). Topical Antiseptics in Minimizing Ocular Surface Bacterial Load Before Ophthalmic Surgery: A Randomized Controlled Trial . American Journal of Ophthalmology.

Federico Gabrielli, Domenico Schiano-Lomoriello, Irene Abicca, Laura Contento, Cinzia Alfonsi, Fabio Di Pietro, Filomena Tiziana Papa, Antonio Ballesteros-Sánchez, José-María Sánchez-González, Carlos Rocha-De-Lossada, et al. (2024). Infectious Keratitis: Characterization of Microbial Diversity through Species Richness and Shannon Diversity Index . Biomolecules.

Federico Gabrielli, Domenico Schiano-Lomoriello, Irene Abicca, Laura Contento, Cinzia Alfonsi, Fabio Di Pietro, Filomena Tiziana Papa, Antonio Ballesteros-Sánchez, José-María Sánchez-González, Carlos Rocha-De-Lossada, et al. (2024). Infectious Keratitis: Characterization of Microbial Diversity through Species Richness and Shannon Diversity Index . Biomolecules.

Federico Gabrielli, Filomena Tiziana Papa, Fabio Di Pietro, Andreu Paytuví-Gallart, Daniel Julian, Walter Sanseverino, Cinzia Alfonsi, Wilfred van IJcken (2024). MaterniCode: New Bioinformatic Pipeline to Detect Fetal Aneuploidies and Rearrangements Using Next‐Generation Sequencing . International Journal of Genomics.