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USD 150 /hr
Hire Dr. Dmitry G.
United States
USD 150 /hr
Expert in bioinformatics, data science and engineering.
Profile Summary
Subject Matter Expertise
Services
Writing
Technical Writing,
Copywriting
Research
Market Research,
User Research,
Meta-Research,
Feasibility Study,
Fact Checking,
Gap Analysis,
Gray Literature Search,
Systematic Literature Review,
Secondary Data Collection
Consulting
Scientific and Technical Consulting
Data & AI
Predictive Modeling,
Statistical Analysis,
Algorithm Design-Non ML,
Data Visualization,
Big Data Analytics,
Data Processing,
Data Insights
Product Development
Formulation,
Product Evaluation
Work Experience
Director, Data Science
Amyris
February 2020 - Present
Director of Data Science and Engineering
CDS - Creative Data Solutions
September 2013 - Present
Education
Analytical Chemistry and Biotechnology
University of California, Davis
September 2007 - August 2012
Certifications
- Certification details not provided.
Publications
JOURNAL ARTICLE
Uusitalo, U., Liu, X., Yang, J., Aronsson, C.A., Hummel, S., Butterworth, M., Lernmark, Å., Rewers, M., Hagopian, W., She, J.-X., et al.(2016). Association of Early Exposure of Probiotics and Islet Autoimmunity in the TEDDY Study . JAMA Pediatrics. 170. (1). p. 20-28.
Fahrmann, J.F., Grapov, D., Defelice, B.C., Taylor, S., Kim, K., Kelly, K., Wikoff, W.R., Pass, H., Rom, W.N., Fiehn, O., et al.(2016). Serum phosphatidylethanolamine levels distinguish benign from malignant solitary pulmonary nodules and represent a potential diagnostic biomarker for lung cancer . Cancer Biomarkers. 16. (4). p. 609-617.
Fattuoni, C., Palmas, F., Noto, A., Barberini, L., Mussap, M., Grapov, D., Dessì, A., Casu, M., Casanova, A., Furione, M., et al.(2016). Primary HCMV infection in pregnancy from classic data towards metabolomics: An exploratory analysis . Clinica Chimica Acta. 460. p. 23-32.
Glenn, D.J., Cardema, M.C., Ni, W., Zhang, Y., Yeghiazarians, Y., Grapov, D., Fiehn, O., Gardner, D.G.(2015). Cardiac steatosis potentiates angiotensin II effects in the heart . American Journal of Physiology - Heart and Circulatory Physiology. 308. (4). p. H339-H350.
Gautam, A., D'Arpa, P., Donohue, D.E., Muhie, S., Chakraborty, N., Luke, B.T., Grapov, D., Carroll, E.E., Meyerhoff, J.L., Hammamieh, R., et al.(2015). Acute and chronic plasma metabolomic and liver transcriptomic stress effects in a mouse model with features of post-traumatic stress disorder . PLoS ONE. 10. (1).
Wanichthanarak, K., Fahrmann, J.F., Grapov, D.(2015). Genomic, proteomic, and metabolomic data integration strategies . Biomarker Insights. 10. p. 1-6.
Grapov, D., Wanichthanarak, K., Fiehn, O.(2015). MetaMapR: Pathway independent metabolomic network analysis incorporating unknowns . Bioinformatics. 31. (16). p. 2757-2760.
Glenn, D.J., Cardema, M.C., Ni, W., Zhang, Y., Yeghiazarians, Y., Grapov, D., Fiehn, O., Gardner, D.G.(2015). Cardiac steatosis potentiates angiotensin ii effects in the heart . American Journal of Physiology - Heart and Circulatory Physiology. 308. (4). p. 339-350.
Grapov, D., Fahrmann, J., Hwang, J., Poudel, A., Jo, J., Periwal, V., Fiehn, O., Hara, M.(2015). Diabetes associated metabolomic perturbations in NOD mice . Metabolomics. 11. (2). p. 425-437.
Cao, Y.-A., Hickerson, R.P., Seegmiller, B.L., Grapov, D., Gross, M.M., Bessette, M.R., Phinney, B.S., Flores, M.A., Speaker, T.J., Vermeulen, A., et al.(2015). Gene expression profiling in pachyonychia congenita skin . Journal of Dermatological Science. 77. (3). p. 156-165.
Kamleh, M.A., Snowden, S.G., Grapov, D., Blackburn, G.J., Watson, D.G., Xu, N., Ståhle, M., Wheelock, C.E.(2015). LC-MS metabolomics of psoriasis patients reveals disease severity-dependent increases in circulating amino acids that are ameliorated by anti-TNFα treatment . Journal of Proteome Research. 14. (1). p. 557-566.
Wikoff, W.R., Grapov, D., Fahrmann, J.F., DeFelice, B., Rom, W.N., Pass, H.I., Kim, K., Nguyen, U.T., Taylor, S.L., Gandara, D.R., et al.(2015). Metabolomic markers of altered nucleotide metabolism in early stage adenocarcinoma . Cancer Prevention Research. 8. (5). p. 410-418.
Liesenfeld, D.B., Grapov, D., Fahrmann, J.F., Salou, M., Scherer, D., Toth, R., Habermann, N., Böhm, J., Schrotz-King, P., Gigic, B., et al.(2015). Metabolomics and transcriptomics identify pathway differences between visceral and subcutaneous adipose tissue in colorectal cancer patients: The ColoCare study . American Journal of Clinical Nutrition. 102. (2). p. 433-443.
Fahrmann, J., Grapov, D., Yang, J., Hammock, B., Fiehn, O., Bell, G.I., Hara, M.(2015). Systemic alterations in the metabolome of diabetic NOD mice delineate increased oxidative stress accompanied by reduced inflammation and hypertriglyceremia . American Journal of Physiology - Endocrinology and Metabolism. 308. (11). p. E978-E989.
Grapov, D., Lemay, D.G., Weber, D., Phinney, B.S., Azulay Chertok, I.R., Gho, D.S., German, J.B., Smilowitz, J.T.(2015). The human colostrum whey proteome is altered in gestational diabetes mellitus . Journal of Proteome Research. 14. (1). p. 512-520.
Schuster, G.U., Bratt, J.M., Jiang, X., Pedersen, T.L., Grapov, D., Adkins, Y., Kelley, D.S., Newman, J.W., Kenyon, N.J., Stephensen, C.B.(2014). Dietary long-chain omega-3 fatty acids do not diminish eosinophilic pulmonary inflammation in mice . American Journal of Respiratory Cell and Molecular Biology. 50. (3). p. 626-636.
Snowden, S.G., Grapov, D., Settergren, M., D'Alexandri, F.L., Haeggström, J.Z., Fiehn, O., Hyötyläinen, T., Pedersen, T.L., Newman, J.W., Orešič, M., et al.(2014). High-dose simvastatin exhibits enhanced lipid-lowering effects relative to simvastatin/ezetimibe combination therapy . Circulation: Cardiovascular Genetics. 7. (6). p. 955-964.
Noto, A., Fanos, V., Barberini, L., Grapov, D., Fattuoni, C., Zaffanello, M., Casanova, A., Fenu, G., De Giacomo, A., De Angelis, M., et al.(2014). The urinary metabolomics profile of an Italian autistic children population and their unaffected siblings . Journal of Maternal-Fetal and Neonatal Medicine. 27. p. 46-52.
Armstrong, A.W., Wu, J., Johnson, M.A., Grapov, D., Azizi, B., Dhillon, J., Fiehn, O.(2014). Metabolomics in psoriatic disease: Pilot study reveals metabolite differences in psoriasis and psoriatic arthritis . F1000Research. 3.
He, Y., Hogrefe, C.E., Grapov, D., Palazoglu, M., Fiehn, O., Turck, C.W., Golub, M.S.(2014). Identifying individual differences of fluoxetine response in juvenile rhesus monkeys by metabolite profiling . Translational Psychiatry. 4. (11).
Barberini, L., Noto, A., Fattuoni, C., Grapov, D., Casanova, A., Fenu, G., Gaviano, M., Carboni, R., Ottonello, G., Crisafulli, M., et al.(2014). Urinary metabolomics (GC-MS) reveals that low and high birth weight infants share elevated inositol concentrations at birth . Journal of Maternal-Fetal and Neonatal Medicine. 27. p. 20-26.
Campbell, C., Grapov, D., Fiehn, O., Chandler, C.J., Burnett, D.J., Souza, E.C., Casazza, G.A., Gustafson, M.B., Keim, N.L., Newman, J.W., et al.(2014). Improved metabolic health alters host metabolism in parallel with changes in systemic xeno-metabolites of gut origin . PLoS ONE. 9. (1).
Smilowitz, J.T., Totten, S.M., Huang, J., Grapov, D., Durham, H.V., Lammi-Keefe, C.J., Lebrilla, C., German, J.B.(2013). Human milk secretory immunoglobulin A and lactoferrin N-glycans are altered in women with gestational diabetes mellitus . Journal of Nutrition. 143. (12). p. 1906-1912.
Grapov, D., Adams, S.H., Pedersen, T.L., Garvey, W.T., Newman, J.W.(2012). Type 2 Diabetes Associated Changes in the Plasma Non-Esterified Fatty Acids, Oxylipins and Endocannabinoids . PLoS ONE. 7. (11).
Grapov, D., Newman, J.W.(2012). imDEV: A graphical user interface to R multivariate analysis tools in Microsoft Excel . Bioinformatics. 28. (17). p. 2288-2290.
Lokvam, J., Clausen, T.P., Grapov, D., Coley, P.D., Kursar, T.A.(2007). Galloyl depsides of tyrosine from young leaves of Inga laurina . Journal of Natural Products. 70. (1). p. 134-136.
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