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Profile Details
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USD 40 /hr
Hire Dr. Bradly A.
United States
USD 40 /hr
Profile Summary
Subject Matter Expertise
Services
Work Experience

Senior Contributor

OpenWorm Foundation

February 2016 - Present

Primary Investigator

Orthogonal Research and Education Laboratory

February 2014 - Present

Postdoctoral Associate

University of Illinois, Urbana-Champaign

November 2014 - January 2016

Innovation Analyst

MSU Technologies

January 2011 - July 2013

Education

PhD (Computational and Cell Biology) (Animal Science, Physiology)

Michigan State University

May 2009 - January 2014

PhD Certificate (CogSci) (Telecommunication, Information Studies, and Media)

Michigan State University

September 2003 - May 2009

Masters (Anthropology)

University of Florida

August 1999 - August 2002

Bachelors (Anthropology)

Michigan State University

August 1991 - August 1997

Certifications
  • Certification details not provided.
Publications
OTHER
Bradly Alicea(2020). Developmental Incongruity as a Dynamical Representation of Heterochrony . Cold Spring Harbor Laboratory
Bradly Alicea, Hrishikesh Kulkarni(2020). Cultural, Emotional, and Associative Traits to Determine Literary Inclination . Center for Open Science
Bradly Alicea(2020). Building a Distributed Virtual Laboratory Adjacent to Academia . Center for Open Science
Bradly Alicea(2020). Raising the Connectome: the emergence of neuronal activity and behavior in C. elegans . Cold Spring Harbor Laboratory
Bradly Alicea, Richard Gordon, Thomas Harbich, Ujjwal Singh, Asmit Singh, Vinay Varma(2019). Towards a Digital Diatom: image processing and deep learning analysis of Bacillaria paradoxa dynamic morphology . Cold Spring Harbor Laboratory
Bradly Alicea(2019). Virtual Reality for Communication Neuroscience . Center for Open Science
Bradly Alicea, Corey Bohil, Frank Biocca, Charles Owen(2019). Targeting in Virtual Workspaces: motor learning consolidates spatial memory for performance clusters . Center for Open Science
Bradly J Alicea, Richard Gordon(2018). Cell Differentiation Processes as Spatial Networks: identifying four-dimensional structure in embryogenesis . {PeerJ}
Bradly J Alicea, Richard Gordon(2018). Cell Differentiation Processes as Spatial Networks: identifying four-dimensional structure in embryogenesis . {PeerJ}
Bradly Alicea, Richard Gordon(2016). Quantifying Mosaic Development: Towards an Evo-Devo Postmodern Synthesis of the Evolution of Development via Differentiation Trees of Embryos . {MDPI} {AG}
Bradly Alicea, Thomas E. Portegys, Richard Gordon(2016). Information Isometry Technique Reveals Organizational Features in Developmental Cell Lineages . Cold Spring Harbor Laboratory
Bradly Alicea(2016). Genotype-specific developmental plasticity shapes the timing and robustness of reproductive capacity {inCaenorhabditis} elegans . Cold Spring Harbor Laboratory
Bradly Alicea(2016). Evolution in Eggs and Phases: experimental evolution of fecundity and reproductive timing {inCaenorhabditis} elegans . Cold Spring Harbor Laboratory
Bradly Alicea (2016). Playing Games With Ideas: When Epistemology Pays Off . Zenodo.
Bradly Alicea, José B. Cibelli(2014). Comparing {SCNT}-Derived {ESCs} and {iPSCs} . 465--471Elsevier {BV}
Bradly Alicea, Corey Bohil, Charles B. Owen, Eui Jun Jeong, Frank Biocca Virtual Reality and Presence . 21st Century Communication: A Reference Handbook 21st century communication: A reference handbook. p. 534--542. {SAGE} Publications
PREPRINT
(2019). Cultural association based on machine learning for team formation.
(2018). An Integrative Introduction to Human Augmentation Science.
JOURNAL ARTICLE
Bradly Alicea, Richard Gordon(2018). Cell differentiation processes as spatial networks: Identifying four-dimensional structure in embryogenesis . Biosystems. 173. p. 235--246. Elsevier {BV}
Bradly Alicea, Robert Stone, Tom Portegys, George Mikhailovsky(2018). Origins of the Embryo: Self-organization through cybernetic regulation . Biosystems. 173. p. 73--82. Elsevier {BV}
Bradly Alicea(2018). The emergent connectome in Caenorhabditis elegans embryogenesis . Biosystems. 173. p. 247--255. Elsevier {BV}
Bradly Alicea, Thomas E. Portegys, Diana Gordon, Richard Gordon(2018). Morphogenetic processes as data: Quantitative structure in the Drosophila eye imaginal disc . Biosystems. 173. p. 256--265. Elsevier {BV}
Bradly Alicea, Gopal P. Sarma, Chee Wai Lee, Tom Portegys, Vahid Ghayoomie, Travis Jacobs, Matteo Cantarelli, Michael Currie, Richard C. Gerkin, Shane Gingell, et al.(2018). {OpenWorm}: overview and recent advances in integrative biological simulation of Caenorhabditis elegans . Philosophical Transactions of the Royal Society B: Biological Sciences. 373. (1758). p. 20170382. The Royal Society
(2018). Morphogenetic processes as data: Quantitative structure in the Drosophila eye imaginal disc . bioRxiv.
Weber R, Alicea B, Huskey R, Mathiak K(2018). Network Dynamics of Attention During a Naturalistic Behavioral Paradigm . Frontiers in human neuroscience.
(2017). How to find a scientific revolution: intellectual field formation and the analysis of terms . Psyarxiv.
(2017). The Long Road to Theoretical Synthesis: review of “Embryogenesis Explained" . International Journal of Developmental Biology.
(2016). Playing Games with Ideas: when epistemology pays off . Journal of Brief Ideas.
Bradly Alicea(2016). Evolution in eggs and phases: experimental evolution of fecundity and reproductive timing in Caenorhabditis elegans . Royal Society Open Science. 3. (11). p. 160496. The Royal Society
Bradly Alicea, Richard Gordon(2016). Quantifying Mosaic Development: Towards an Evo-Devo Postmodern Synthesis of the Evolution of Development via Differentiation Trees of Embryos . Biology. 5. (3). p. 33. {MDPI} {AG}
Bradly Alicea, Richard Gordon(2014). Toy models for macroevolutionary patterns and trends . Biosystems. 123. p. 54--66. Elsevier {BV}
Bradly Alicea, Richard Gordon(2014). Toy models for macroevolutionary patterns and trends . Biosystems. 123. p. 54--66. Elsevier {BV}
Alicea B (2014) Animal-oriented virtual environments: illusion, dilation, and discovery [v1; http://f1000r.es/2xt] F1000Research 2014, 3:202 (doi: 10.12688/f1000research.3557.1) .
Bradly Alicea, Shashanka Murthy, Sarah A. Keaton, Peter Cobbett, Jose B. Cibelli, Steven T. Suhr(2013). Defining the Diversity of Phenotypic Respecification Using Multiple Cell Lines and Reprogramming Regimens . Stem Cells and Development. 22. (19). p. 2641--2654. Mary Ann Liebert Inc
Bradly Alicea, Corey J. Bohil, Frank A. Biocca(2011). Virtual reality in neuroscience research and therapy . Nature Reviews Neuroscience. Nature Publishing Group
Bradly Alicea(2009). Range-based techniques for discovering optimality and analyzing scaling relationships in neuromechanical systems . Nature Precedings. Nature Publishing Group
BOOK CHAPTER
(2016). Morphozoic: cellular automata with nested neighborhoods as a metamorphic representation of morphogenesis . Multi-Agent Based Simulations Applied to Biological and Environmental Systems.
REPORT
B. Alicea, S. McGrew, R. Gordon, S. Larson, T. Warrington, M. Watts(2014). {DevoWorm}: differentiation waves and computation in C. elegans embryogenesis . Cold Spring Harbor Laboratory Press
B. Alicea(2014). Modeling Cellular Information Processing Using a Dynamical Approximation of Cellular {mRNA} . Cold Spring Harbor Laboratory Press
B. Alicea(2014). Using Polysome Isolation with Mechanism Alteration to Uncover Transcriptional and Translational Dynamics in Key Genes . Cold Spring Harbor Laboratory Press
B. J. Alicea(2013). Filling up the tree: considering the self-organization of avian roosting behavior . Cold Spring Harbor Laboratory Press