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Contact Biswanath S.

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USD 45 /hr

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Hire Biswanath S.

Japan

USD 45 /hr

Machine Learning & Biomedical Imaging Specialist | Advanced Image Analysis & Data Science Expert |

Profile Summary

I am a Neuroscience PhD researcher with 3+ years of hands-on experience applying machine learning, deep learning, and advanced image analysis to large-scale biomedical datasets. My work focuses on building scalable, automated pipelines for microscopy and medical imaging, extracting meaningful insights from high-dimensional, complex data.

My GitHub page: https://github.com/Elsword016
I specialize in:

- Biomedical image analysis (microscopy, fluorescence, cell/brain imaging)

- Deep learning & computer vision (CNNs, ViTs, segmentation, classification)

- Custom pipeline development for terabyte-scale datasets

- Data science & statistical modeling (Python, MATLAB, SQL)

- Model fine-tuning using transformers (ViT, BERT, Pali-GEMMA)

- Automated analysis tools & visualization libraries

My research contributions include developing an automated brain imaging pipeline and contributing to Nature Communications, along with open-source contributions to tools like Brainglobe. I also design custom algorithms, build pip-installable ML libraries, and create publication-ready visualizations for scientific teams.

I help biomedical, research, and data-driven teams:

- Analyze imaging data efficiently

- Build and fine-tune ML models

- Develop automated workflows

- Convert messy data into clear, actionable insights

- Create maintainable, scalable Python solutions

Whether your project requires deep learning models, image processing, data science, or custom algorithm development, I bring strong technical expertise, clear communication, and a collaborative mindset to deliver high-quality results.

Subject Matter Expertise

Services

Writing
Consulting
Data & AI

Writing Technical Writing, Copywriting, Creative Writing

Consulting Scientific and Technical Consulting

Data & AI Statistical Analysis, Image Processing, Image Analysis, Data Visualization, Big Data Analytics, Data Insights

Work Experience

PhD Student

Kyushu University

April 2021 - Present

Education

BS-MS (Biological Sciences)

Indian Institute of Science Education and Research Kolkata

August 2016 - August 2021

Certifications

Computational Neuroscience

Neuromatch Academy
https://portal.neuromatchacademy.org/certificate/9d03005b-225e-41ff-808c-7f5b6590e935
January 2025 - Present
Google Data Analytics

Google
https://coursera.org/share/ebcc1b8f85b25ca3084139a7380b8375
January 2025 - January 2025

Publications

JOURNAL ARTICLE

Biswanath Saha, Marcus N. Leiwe, Satoshi Fujimoto, Toshikazu Baba, Daichi Moriyasu, Richi Sakaguchi, Shigenori Inagaki, Takeshi Imai (2024). Automated neuronal reconstruction with super-multicolour Tetbow labelling and threshold-based clustering of colour hues . Nature Communications.

PREPRINT

Automated neuronal reconstruction with super-multicolour fluorescence imaging <head> <META HTTP-EQUIV="Refresh" CONTENT="0;URL=/servlet/useragent"> </head> .

level-one heading

Machine Learning & Biomedical Imaging Specialist | Advanced Image Analysis & Data Science Expert |

PhD Student

Kyushu University

BS-MS (Biological Sciences)

Indian Institute of Science Education and Research Kolkata

Computational Neuroscience

Neuromatch Academy

Google Data Analytics

Google