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★★★★★

☆☆☆☆☆

USD 40 /hr

★★★★★

☆☆☆☆☆

Hire Dr. Amit Kumar B.

India

USD 40 /hr

More than 15 years experience in medical writing, publishing, analysis in R & SPSS, Bioinformatics, research design.

Profile Summary

Ph.D. with 15+ years of experience in medical writing, article writing, bioinformatics, and biostatistical analysis. Published ~100 articles, supported in more than 250 projects.

Subject Matter Expertise

• ★ Omics
• ★ Comparative Genomics
• ★ Genomics
• ☆ Computational Biology
• ☆ Microbiology
• ☆ Microbiome Research
• ☆ Phycology/Algae
• ☆ Mycology/Fungi
• ☆ Parasitology
• ☆ Industrial Microbiology
• ☆ Microbiological Assays
• ☆ Agricultural Microbiology
• ☆ Biochemistry
• ☆ Immunoassay
• ☆ Biochemical Assays
• ☆ Structural Biology
• ☆ Apoptosis
• ☆ Oxidative Stress & Mitochondrial Function
• ☆ Antioxidants
• ☆ Enzyme Activity Assays
• ☆ Binding Assays
• ☆ Molecular Biology
• ☆ Biomarkers
• ☆ Genetics
• ☆ Microarrays
• ☆ Transcriptomics
• ☆ Lipidomics
• ☆ Proteomics
• ☆ Metabolomics
• ☆ Molecular Evolution
• ☆ Chromatin
• ☆ Epigenetics
• ☆ PCR
• ☆ Molecular Cloning
• ☆ Next Generation Sequencing (NGS)
• ☆ ATAC-Seq
• ☆ DNA Sequencing
• ☆ Synthetic Genomics
• ☆ Protein Sequencing
• ☆ Gene Expression Analysis
• ☆ Genome Sequencing
• ☆ Microinjection
• ☆ Mutagenesis
• ☆ Exome Sequencing
• ☆ Recombinant DNA
• ☆ RNA Synthesis
• ☆ RNA Sequencing
• ☆ DNA/Gene Synthesis
• ☆ Oligonucleotide Synthesis
• ☆ Plasmid DNA
• ☆ DNA Damage & Repair
• ☆ ChIP-Seq
• ☆ Kinases
• ☆ Monoclonal Antibody Production
• ☆ Molecular Ecology
• ☆ Cell Biology
• ☆ Cell-Based Assays
• ☆ Cytochemistry
• ☆ Cytogenetics
• ☆ Cell Signaling Pathways
• ☆ Membrane Biology
• ☆ Gene Regulation
• ☆ Stem Cell Research
• ☆ Biotechnology & Bioengineering
• ☆ Recombinant Protein Expression
• ☆ Nanobiotechnology
• ☆ Microbial Biotechnology
• ☆ Biomedical Engineering
• ☆ Biomechanics
• ☆ Biological Systems Engineering
• ☆ Pathogenesis
• ☆ Clinical Microbiology
• ☆ Biomarker Discovery
• ☆ Cell Culture
• ☆ Primary Cells
• ☆ Cell Surface Receptors
• ☆ Industrial Biotechnology
• ☆ Synthetic Biology
• ☆ Microbial Fermentation
• ☆ Chemical Biology
• ☆ Blotting
• ☆ Immunohistochemistry
• ☆ Phylogenetics
• ☆ Population Genetics
• ☆ Cytometry
• ☆ Cell Aging
• ☆ Medical Technologies
• ☆ Assistive Technology
• ☆ R

Services

• Writing
• Research
• Consulting
• Data & AI

Writing Clinical Trial Documentation, Medical Writing, Non-Medical Regulatory Writing, Technical Writing, Business & Legal Writing, Copywriting, Creative Writing, Newswriting, General Proofreading & Editing

Research Market Research, User Research, Meta-Research, Feasibility Study, Technology Scouting, Fact Checking, Gap Analysis, Gray Literature Search, Scientific and Technical Research, Systematic Literature Review, Secondary Data Collection

Consulting Business Strategy Consulting, Digital Strategy Consulting, Healthcare Consulting, Scientific and Technical Consulting, Regulatory Consulting

Data & AI Predictive Modeling, Statistical Analysis, Data Visualization, Big Data Analytics, Text Mining & Analytics, Data Mining, Data Cleaning, Data Processing, Data Insights

Work Experience

Deputy Manager

Viatris Inc.

June 2021 - Present

Senior Medical Writer and Consultant

ResearPro Pvt. Ltd.

September 2020 - May 2021

Global Head, Scientific Affairs, Clinical Trials

Ixoreal Biomed Inc.

May 2019 - August 2020

Senior Medical Writer

ResearPro Pvt. Ltd.

April 2018 - April 2019

Senior Manager

Pulsus Publishing Group

February 2015 - April 2018

Research Fellow

Indian Institute of Chemical Technology

December 2011 - April 2015

Senior Research Fellow (CSIR)

Indian Institute of Chemical Technology

November 2008 - November 2011

Project Assistant (Level-II)

Indian Institute of Chemical Technology

June 2006 - October 2008

Education

Ph.D in Computational Biology (Biology)

Indian Institute of Chemical Technology

January 2009 - May 2015

PG Diploma in Patent Laws (DDE)

NALSAR University of Law

July 2007 - October 2008

M.Phil(Biotechnology) (DDE)

Vinayaka Missions University

June 2007 - September 2008

Advanced Course in Bioinformatics (Biology)

Indian Institute of Chemical Technology

September 2005 - February 2006

Advanced Diploma in Bioinformatics (Bioinformatics)

Software Technology Group International

September 2004 - March 2005

M.Sc.(Biotechnology) (Biotechnology)

Bangalore University

August 2002 - September 2004

B.Sc. (Physiology Hons) (Physiology)

University of Burdwan

July 1999 - August 2002

Certifications

• Advanced Course in Bioinformatics

  CDAC Pune, CSIR-IICT, JNTUH

  January 2023 - Present

• Technology Led Entrepreneurship (TLEP)

  MHRD CSIR and IIM, Bangalore

  January 2023 - Present

• Project Management Professional (PMP) Training

  MSME-TECHNOLOGY DEVELOPMENT CENTRE (PPDCAGRA)

  January 2023 - Present

• Certification in Digital Marketing

  MSME-TECHNOLOGY DEVELOPMENT CENTRE (PPDCAGRA)

  January 2023 - Present

• Certificate on Using proper manuscript language

  Elsevier for Health

  January 2023 - Present

Publications

JOURNAL ARTICLE

(2020). The role of artificial intelligence in tackling COVID-19 . Future Virology.

Neelima Arora, Amit K Banerjee, Mangamoori L Narasu(2020). The role of artificial intelligence in tackling COVID-19 . Future Virology. 15. (11). p. 717--724. Future Medicine Ltd

(2020). Coronavirus Disease (COVID-19) Pandemic: A Race Against Time . Current Topics in Medicinal Chemistry.

(2020). Machine learning techniques in biological data classification and clustering: Initiation of a scientific voyage . Journal of PeerScientist.

(2020). Comparative analysis of Hemagglutinin of 2013 H3N2 Influenza A virus Indicates its Evolution from 1968 H3N2 Pandemic Influenza A virus . Archives of Preventive Medicine.

(2019). Dereplication in Natural Product Discovery . Current topics in medicinal chemistry.

(2018). Zika outbreak aftermath: status, progress, concerns and new insights . Future Virology.

Banerjee, Amit Kumar and Arora, Neelima(2018). Neurology in the Light of Genomics: Application of NGS and GWAS in Understanding Complex Neurological Disorders . Neuropsychiatry(London). 8. (3). p. 1115. OpenAccessJournals.com

(2018). Structural analysis of the Babesia microti thioredoxin reductase: a potential drug target for babesiosis treatment . Biomedical Research.

Choudhury, A., Sahu, T., Ramanujam, P.L., Banerjee, A.K., Chakraborty, I., Kumar, A.R., Arora, N.,2018.Neurochemicals, Behaviours and Psychiatric Perspectives of Neurological Diseases. Neuropsychiatry, 8(1),p.395-424 .

(2018). Computer Aided Drug Design for Combating Diseases (Part-III) . Current topics in medicinal chemistry.

(2018). Computer Aided Drug Design for Combating Diseases (Part-II) . Current topics in medicinal chemistry.

(2018). Computer Aided Drug Designing for Combating Diseases (Part 1) . Current topics in medicinal chemistry.

Arora N, Banerjee AK, Narasu ML. Zika virus: an emerging arboviral disease .

Arora N, Narasu ML, Banerjee AK. Shikimate Kinase of Yersinia pestis: A Sequence, Structural and Functional Analysis. Int J Biomed Data Min. 2016;5(119):2 .

Banerjee AK. Computation in Analyzing Inflammation: A General Perspective. Interdiscip J Microinflammation. 2015;2(1000130):2 .

Pal-Bhadra VR, Arora N, Shinde Santosh P, Ray P. Target sites for microRNA expressed in pancreatic islets in Type 2 diabetes mellitus associated genes. Online Journal of Bioinformatics. 2010;11(2):224-43.

Arora N, Banerjee AK. Emerging Trends, Challenges and Prospects in Healthcare in India. Elect J Biolo. 2010;6:24-5.

Arora N, Banerjee AK, Murty US. Homology model of 2C-methyl-d-erythritol 2, 4-cyclodiphosphate (MECP) synthase of Plasmodium falciparum 3D7. Electronic Journal of Biology. 2010;6(2):52-7.

Duddela S, Sekhar PN, Padmavati GV, Banerjee AK, Murty US. Probing the structure of human glucose transporter 2 and analysis of protein ligand interactions. Medicinal chemistry research. 2010 Nov 1;19(8):836-53 .

Murty US, Banerjee AK, Arora N. An in silico approach to cluster CAM kinase protein sequences. J Proteomics Bioinform. 2009;2:97-107 .

Banerjee AK, Arora N, Pranitha V, Murty US. Exploring the interplay of sequence and structural features in determining the flexibility of AGC kinase protein family: a bioinformatics approach. Journal of Proteomics and Bioinformatics. 2008;1:77-89 .

Banerjee AK, Arora N, Murty US. Clustering and classification of anopheline spacer sequences using self organizing maps. The Internet Journal of Genomics and Proteomics. 2009;4(1):2.

Banerjee AK, Arora N, Murty US. Classification and regression tree (CART) analysis for deriving variable importance of parameters influencing average flexibility of CaMK kinase family. Electronic Journal of Biology. 2008;4(1):27-33.

Banerjee AK, Arora N, Murty US. Stability of ITS2 secondary structure in Anopheles: what lies beneath. International Journal of Integrative Biology. 2007;1(3):232.

Arora N, Chari UV, Banerjee AK, Murty US. A computational approach to explore Plasmodium falciparum 3D7 chorismate synthase. Internet J Genomics Proteomics. 2007;3(1).

Banerjee AK, Murty US. Extracting the significant descriptors by 2D QSAR and docking efficiency of NRTI drugs: a molecular modeling approach. Internet J Genomics Proteomics. 2007;2(2).

Banerjee AK, Arora N, Murty US. How far is ITS2 reliable as a phylogenetic marker for the mosquito genera. Electronic Journal of Biology. 2007;3(3):61-8.

Banerjee A. An insight into the ethical issues related to in vitro fertilization. The Internet Journal of Health. 2006;6(1).

Structural model of the Plasmodium falciparum thioredoxin reductase:a novel target for antimalarial drugs . J Vector Borne Dis.

Application of Kohonen maps for solving the classification puzzle in AGC kinase protein sequences . Interdiscip Sci.

Amit Kumar Banerjee, Neelima Arora, Upadhyayula Surya Narayana Murty, 2012, 'Aspartate carbamoyltransferase of Plasmodium falciparum as a potential drug target for designing anti-malarial chemotherapeutic agents', <i>Medicinal Chemistry Research</i>, vol. 21, no. 9, pp. 2480-2493 .

Amit Kumar Banerjee, K. Kiran, U.S.N. Murty, Ch. Venkateswarlu, 2008, 'Classification and identification of mosquito species using artificial neural networks', <i>Computational Biology and Chemistry</i>, vol. 32, no. 6, pp. 442-447 .

Targeting strategies for Human immunodeficiency virus: a combinatorial approach . Mini Rev Med Chem.

In silico characterization of Shikimate Kinase of Shigella flexneri: a potential drug target . Interdiscip Sci.

Assessing the relationship among physicochemical properties of proteins with respect to hydrophobicity: a case study on AGC kinase superfamily . Indian J Biochem Biophys.

Computational approach for elucidating interactions of cross-species miRNAs and their targets in Flaviviruses . J Vector Borne Dis.

Targeting tuberculosis: a glimpse of promising drug targets . Mini Rev Med Chem.

Amit Kumar Banerjee, Nayanoori Harikrishna, Jangam Vikram Kumar, Upadhyayula Suryanarayana Murty, 2011, 'TOWARDS CLASSIFYING ORGANISMS BASED ON THEIR PROTEIN PHYSICOCHEMICAL PROPERTIES USING COMPARATIVE INTELLIGENT TECHNIQUES', <i>Applied Artificial Intelligence</i>, vol. 25, no. 5, pp. 426-439 .

Neelima Arora, Amit Kumar Banerjee, Srilaxmi Mutyala, U. S. N Murty, 2009, 'Comparative characterization of commercially important xylanase enzymes', <i>Bioinformation</i>, vol. 3, no. 10, pp. 446-453 .

New targets, new hope: novel drug targets for curbing malaria . Mini Rev Med Chem.

Analyzing a Potential Drug Target N-Myristoyltransferase of Plasmodium falciparum Through In Silico Approaches . J Glob Infect Dis.

Application of intelligent techniques for classification of bacteria using protein sequence-derived features . Appl Biochem Biotechnol.

Amit Kumar Banerjee, Sunita M., Naveen M, U. S. N. Murty, 2010, 'Classification and clustering analysis of pyruvate dehydrogenase enzyme based on their physicochemical properties', <i>Bioinformation</i>, vol. 4, no. 10, pp. 456-462 .

Editorial: looking beyond the obvious: search for novel targets and drugs for reducing the burden of infectious diseases . Mini Rev Med Chem.

Keratin protein property based classification of mammals and non-mammals using machine learning techniques . Comput Biol Med.

U.S.N Murty, Amit Kumar Banerjee, Neelima Arora, 2009, 'An In Silico Approach to Cluster CAM Kinase Protein Sequences', <i>Journal of Proteomics &amp; Bioinformatics</i>, vol. 02, no. 02, pp. 097-107 .

CONFERENCE ABSTRACT

(2017). Identification of the most influential feature of Pullulanase and inter parametric relationships through advanced bioinformatics techniques. INTERNATIONAL CONFERENCE ON BIOTECHNOLOGY & BIOENGINEERING - TRENDS ICBT 2017.

BOOK CHAPTER

Banerjee AK, Wu J. West Nile Virus: A Narrative from Bioinformatics and Mathematical Modeling Studies. Analyzing and Modeling Spatial and Temporal Dynamics of Infectious Diseases. 2014 Dec 1:45 .

Suryanarayana Murty U, Banerjee AK. Seaweeds: The Wealth of Oceans. Handbook of Marine Macroalgae: Biotechnology and Applied Phycology. 2012:36-44 .

Murty US, Banerjee AK. Bioinformatics with Solutions in Pest Management Science: An Insight into the Evolving Technologies. Pests and Pathogens: Management Strategies. 2011:521.

Upadhyayula Suryanarayana Murty, Amit Kumar Banerjee, 2011, 'Seaweeds: The Wealth of Oceans', <i>Biotechnology and Applied Phycology</i>, pp. 36-44 .