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Profile Details
Contact
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Hire Dr. Varun b Kothamachu
India
Profile Summary
Subject Matter Expertise
Services
Work Experience

Lead Scientist

Digi.Bio

July 2019 - Present

PDRA Control Engineering and Synthetic Biology

University of Edinburgh

November 2017 - April 2019

Postdoctoral Computational Biologist

Babraham Institute

November 2016 - November 2017

BRIO Intern

GlaxoSmithkline

March 2010 - May 2015

Visiting researcher

University of Copenhagen

January 2013 - February 2013

Education

PhD in mathematics (mathematics)

University of Exeter

December 2010 - November 2014

MSc, Drug Discovery and Translational Biology (School of Biological Sciences )

University of Edinburgh

September 2008 - August 2009

Bachelor of Engineering in Biotechnology (Biotechnology)

Visvesvaraya Technological University

November 2004 - May 2008

Bachelors, Engineering

Visvesvaraya Technological University

October 2004 - May 2008

Certifications
  • Certification details not provided.
Publications
JOURNAL ARTICLE
Varun B. Kothamachu, Sabrina Zaini, Federico Muffatto(2020). Role of Digital Microfluidics in Enabling Access to Laboratory Automation and Making Biology Programmable . SLAS TECHNOLOGY: Translating Life Sciences Innovation. 25. (5). p. 411--426. {SAGE} Publications
Varun Bhaskar Kothamachu, Sabrina Zaini, Federico Muffatto(2020). Role of Digital Microfluidics in Enabling Access to Laboratory Automation and Making Biology Programmable . SLAS technology.
Mihai Glonț, Tung Nguyen V. N., Martin Graesslin, Robert Hälke, Raza Ali, Jochen Schramm, Sarala Wimalaratne, Varun Bhaskar Kothamachu, Nicolas Rodriguez, Maciej J. Swat, et al.(2017). BioModels: expanding horizons to include more modelling approaches and formats . Nucleic acids research.
Varun B Kothamachu, Mihai Glont, Tung V N Nguyen, Martin Graesslin, Robert Hälke, Raza Ali, Jochen Schramm, Sarala M Wimalaratne, Nicolas Rodriguez, Maciej J Swat, et al.(2017). BioModels: expanding horizons to include more modelling approaches and formats . Nucleic Acids Research. 46. (D1). p. D1248--D1253. Oxford University Press ({OUP})
Janna Hastings, Abraham Mains, Marta Artal-Sanz, Sven Bergmann, Bart P. Braeckman, Jacob Bundy, Filipe Cabreiro, Paul D. Dobson, Paul R. Ebert, Jake Hattwell, et al.(2017). WormJam: A consensus C. elegans Metabolic Reconstruction and Metabolomics Community and Workshop Series . Worm.
Janna Hastings, Abraham Mains, Marta Artal-Sanz, Sven Bergmann, Bart P. Braeckman, Jake Bundy, Filipe Cabreiro, Paul Dobson, Paul Ebert, Jake Hattwell, et al.(2017). WormJam: A consensus C. elegans Metabolic Reconstruction and Metabolomics Community and Workshop Series . Worm. 6. (2). p. e1373939. Informa {UK} Limited
Varun Bhaskar Kothamachu, Elisenda Feliu, Luca Cardelli, Orkun S. Soyer(2015). Unlimited multistability and Boolean logic in microbial signalling . Journal of the Royal Society, Interface.
Varun B. Kothamachu, Elisenda Feliu, Luca Cardelli, Orkun S. Soyer(2015). Unlimited multistability and Boolean logic in microbial signalling . Journal of The Royal Society Interface. 12. (108). p. 20150234. The Royal Society
Kothamachu, Varun B. and Feliu, Elisenda and Cardelli, Luca and Soyer, Orkun S.(2015). Unlimited multistability and Boolean logic in microbial signalling . Journal of The Royal Society Interface. 12. (108). p. 20150234.
Munia Amin, Varun Bhaskar Kothamachu, Elisenda Feliu, Birgit E. Scharf, Steven Porter, Orkun S. Soyer(2014). Phosphate Sink Containing Two-Component Signaling Systems as Tunable Threshold Devices . PLoS computational biology.
Amin, Munia and Kothamachu, Varun B. and Feliu, Elisenda and Scharf, Birgit E. and Porter, Steven L. and Soyer, Orkun S.(2014). Phosphate Sink Containing Two-Component Signaling Systems as Tunable Threshold Devices . PLoS Comput Biol. 10. (10). p. e1003890.
Varun Bhaskar Kothamachu, Elisenda Feliu, Carsten Wiuf, Luca Cardelli, Orkun Soyer(2013). Phosphorelays provide tunable signal processing capabilities for the cell . PLoS computational biology.
Kothamachu, Varun B. and Feliu, Elisenda and Wiuf, Carsten and Cardelli, Luca and Soyer, Orkun S.(2013). Phosphorelays Provide Tunable Signal Processing Capabilities for the Cell . PLoS Comput Biol. 9. (11). p. e1003322.
PREPRINT
Lucia Bandiera, Varun Bhaskar Kothamachu, Eva Balsa-Canto, Peter S. Swain, Filippo Menolascina(2018). Optimally designed vs intuition-driven inputs: the study case of promoter activity modelling .
OTHER
L. Bandiera, V. Kothamachu, E. Balsa-Canto, P. S. Swain, F. Menolascina(2018). Optimally designed vs intuition-driven inputs: the study case of promoter activity modelling . Cold Spring Harbor Laboratory